Job Description P0A821 Confidence 99.92% Date Thu Jan 5 11:06:39 GMT 2012 Rank 55 Aligned Residues 292 % Identity 19% Template c3h7fB_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine hydroxymethyltransferase 1; PDBTitle: crystal structure of serine hydroxymethyltransferase from2 mycobacterium tuberculosis Resolution 1.50 Å

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		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.										.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.																					.
Query SS confidence																								.	.	.	.	.	.	.	.	.																					.
Query Sequence		E	A	V	A	Q	A	M	R	S	P	V	T	L	E	Y	D	L	D	D	A	G	R	.	.	.	.	.	.	.	.	.	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	A	E	D	A	.	C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	A	T	A	S	G	K	E	V	V	V	S	R	G
Query Conservation																								.	.	.	.	.	.	.	.	.																					.
Alig confidence																								.	.	.	.	.	.	.	.	.																					.
Template Conservation
Template Sequence		R	A	V	L	Q	A	Q	G	S	V	L	T	N	K	Y	A	E	G	L	P	G	R	R	Y	Y	G	G	C	E	H	V	D	V	V	E	N	L	A	R	D	R	A	K	A	L	F	G	A	E	F	A	N	V	Q	P	H	S	G	A	Q	A	N	A	A	V	L	H	A	L	M	S	P	G	E	R	L	L	G	L	D
Template Known Secondary structure									T	S	G	G	G	G							T	T			S	S	S																					T		S							S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		E	L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	R	.	.	.	T	H	A	N	D	Y	R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L	G	K	E	L	D
Query Conservation																																.	.	.
Alig confidence																																.	.	.																														.	.	.	.	.
Template Conservation																																																																.	.	.	.	.
Template Sequence		L	A	N	G	G	H	L	T	H	G	M	R	L	N	F	S	G	K	L	Y	E	N	G	F	Y	G	V	D	P	A	T	H	L	I	D	M	D	A	V	R	A	T	A	L	E	F	R	P	K	V	I	I	A	G	W	S	A	Y	P	R	V	L	.	.	.	.	.	D	F	A	A	F	R	S	I	A	D	E	V	G
Template Known Secondary structure		G	G	G	T			G	G	G	T		T	T	S					S	S									T	T	T		S																S							S	S			S			.	.	.	.	.													T
Template Predicted Secondary structure																																																																.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.						180	.	.	.	.	.	.	.	.	.	190	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	G	G	P	Q	A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	.	P	L	K	R	A	L	R	A	D	K	M	T	L
Query Conservation																																																																				.
Alig confidence																				.	.	.	.	.	.	.								.											.																							.
Template Conservation																				.	.	.	.	.	.	.								.											.
Template Sequence		A	K	L	L	V	D	M	A	H	F	A	G	L	V	A	A	G	L	.	.	.	.	.	.	.	H	P	S	P	V	P	H	.	A	D	V	V	S	T	T	V	H	T	.	L	G	G	G	R	S	G	L	I	V	G	K	Q	Q	Y	A	K	A	I	N	S	A	V	F	P	G	Q	Q	G	G	P	L	M	H	V	I
Template Known Secondary structure									T	T	T						T	T	S	.	.	.	.	.	.	.	S			S	T	T	T	.		S									.					S								G	G	G									T	T	T	T		S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.								.											.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210								.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q	R	L	Q	A	P	L	A	A	H	Y	G	A	E	F	A	V	Q	V	M	P	C	L	S	Q	I	G	S	G	S	L	P	V	D	R	L	P	S	A	A	L	T	F
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	K	A	V	A	L	K	I	A	A	T	P	E	F	.	.	.	.	.	.	.	.	.	.	.	A	D	R	Q	R	R	T	L	S	G	A	R	I	I	A	D	R	L	M	A	P	D	V	A	K	A	G	V	S	V	V	S	G	G	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	V	H	L	V	L
Template Known Secondary structure												T	S				.	.	.	.	.	.	.	.	.	.	.																			S	S						T	T				G	G	G	S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.												280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.														.	.	.	.	320
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	H	D	G	R	G	S	H	L	E	S	L	A	A	R	W	R	E	L	P	V	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	L	R	D	S	P	L	D	G	Q	A	A	E	D	L	L	H	E	V	G	I	T	V
Template Known Secondary structure					T	T	S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions