Job Description P0A821 Confidence 100.00% Date Thu Jan 5 11:06:39 GMT 2012 Rank 9 Aligned Residues 289 % Identity 17% Template c3gwpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:carbon-sulfur lyase involved in aluminum resistance; PDBTitle: crystal structure of carbon-sulfur lyase involved in aluminum2 resistance (yp_878183.1) from clostridium novyi nt at 2.90 a3 resolution Resolution 2.90 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.
Query SS confidence																																																																								.	.	.
Query Sequence		L	R	P	V	I	N	L	T	G	T	V	L	H	T	N	L	G	R	A	L	Q	A	E	A	A	V	E	A	V	A	Q	A	M	R	S	P	V	T	L	E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	A	E	D	A	C	I	.	.	.	V	N	N	N	A	A	A
Query Conservation																																																																								.	.	.
Alig confidence																				.	.	.	.	.	.																																															.	.	.
Template Conservation																				.	.	.	.	.	.
Template Sequence		I	Q	N	Q	F	K	I	L	D	D	I	R	E	F	N	Q	L	K	.	.	.	.	.	.	V	L	N	A	F	Q	E	E	R	I	S	E	A	H	F	T	N	S	S	G	Y	G	Y	G	D	I	G	R	D	S	L	D	A	V	Y	A	R	V	F	N	T	E	S	A	L	V	R	P	H	F	V	N	G	T	H	A
Template Known Secondary structure		T																		.	.	.	.	.	.								T	T			G	G	G	S					T	T		T	T															T	T		S					B	T	T			S
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.							.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		157	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.						180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure											.															.	.	.	.	.									.																	.	.																								.
Query SS confidence											.															.	.	.	.	.									.																	.	.																								.
Query Sequence		V	L	L	M	L	A	A	T	A	.	S	G	K	E	V	V	V	S	R	G	E	L	V	E	.	.	.	.	.	I	G	G	A	F	R	I	P	.	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	.	.	N	R	T	H	A	N	D	Y	R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	.
Query Conservation											.															.	.	.	.	.									.																	.	.																								.
Alig confidence											.															.	.	.	.	.									.																	.	.																								.
Template Conservation
Template Sequence		L	G	A	A	L	F	G	N	L	R	P	G	N	T	X	L	S	V	C	G	E	P	Y	D	T	L	H	D	V	I	G	I	T	E	N	S	N	X	G	S	L	K	E	F	G	I	N	Y	K	Q	V	D	L	K	E	D	G	K	P	N	L	E	E	I	E	K	V	L	K	E	D	E	S	I	T	L	V	H	I	Q
Template Known Secondary structure												T	T						S	S	S	S			T	T						T	S	S				T	T			T	G	G	G	T								B		T	T	S	S	B													T	T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
							227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																											.	.
Query SS confidence		.	.	.	.	.																											.	.
Query Sequence		.	.	.	.	.	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L	G	K	E	L	D	.	.	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	G	G
Query Conservation		.	.	.	.	.																											.	.
Alig confidence		.	.	.	.	.							.	.	.	.																	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	S	T	G	Y	G	W	R	R	A	L	.	.	.	.	L	I	E	D	I	K	S	I	V	D	C	V	K	N	I	R	K	D	I	I	C	F	V	D	N	C	Y	G	E	F	X	.	.	.	.	.	.	.	.	.	.	.	D	T	K	E	P	T	D	V	G	A	D	L	I	A	G	S	L	I	N	I	G	G	G
Template Known Secondary structure			S		T	T		S	S				.	.	.	.																	T	T	S							T	T		T	T	S	.	.	.	.	.	.	.	.	.	.	.	S	S	S		G	G	G	G	T		S									T	T	T	T
Template Predicted Secondary structure													.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.					.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.												.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
				300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.					.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure		.	.																				.	.	.	.																																															.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																				.	.	.	.																																															.	.	.	.	.	.	.	.	.
Query Sequence		.	.	P	Q	A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	.	.	.	.	P	L	K	R	A	L	R	A	D	K	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	.	.	.	.	.	.	.	.	.
Query Conservation		.	.																				.	.	.	.																																															.	.	.	.	.	.	.	.	.
Alig confidence		.	.																				.	.	.	.																					.	.																									.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.
Template Sequence		I	A	P	T	G	G	Y	L	A	G	T	K	D	C	I	E	K	T	S	Y	R	L	T	V	P	G	I	G	G	E	C	G	S	T	F	G	V	V	R	S	X	Y	Q	G	L	.	.	F	L	A	P	H	I	S	X	E	A	L	K	G	A	I	L	C	S	R	I	X	E	L	A	G	F	E	V	X	P	K	Y	D
Template Known Secondary structure		T			S																			S		T	T	T	G	G	G	S				T	T										.	.																								T	T					S		T	T
Template Predicted Secondary structure																																															.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
																365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	I	Q	A	Q	R	L	Q	A	P	L	A	A	H	Y	G	A	E	F	A	V	Q	V	M	P	C	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	K	R	S	D	I	I	Q	S	I	K	F	N	D	K	D	K	L	I	E	F	C	K	G	I	Q	T	G	S	P	I	D	S	F	V	S	C	E	P	W	D
Template Known Secondary structure		S			S	S	S							S	S														T		S	S	S	S	S						B
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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