 |
Job Description | P0A821 | Confidence | 28.87% | Date | Thu Jan 5 11:06:39 GMT 2012 |
Rank | 450 | Aligned Residues | 65 |
% Identity | 11% | Template | c3gfgB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:uncharacterized oxidoreductase yvaa; |
PDBTitle: structure of putative oxidoreductase yvaa from bacillus subtilis in2 triclinic form
|
Resolution | 2.59 Å |
|
 |
  |   |
186 | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | P | D | V | M | R | Q | A | G | C | T | L | H | E | V | G | T | T | N | R | T | H | A | N | D | Y | R | Q | A | V | N | E | N | T | A | L | L | M | K | V | H | T | S | N | Y | S | I | Q | G | F | T | K | A | I | D | E | A | E | L | V | A | L | G | K | E | L | D | V | P | V | V | T |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |   |   |   |   |
|   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
| . |
|
|
|   |   |
|
|
|   |
|   |   |   |   | . | . | . | . | . | . |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|
Template Sequence |   |
L | E | E | I | T | N | D | P | A | I | E | L | V | I | V | T | T | P | S | G | L | H | Y | E | H | T | M | A | C | I | Q | A | G | . |
K | H | V | V | M | E | K | P | M | T | A | T | A | E | . |
. |
. |
. |
. |
. |
E | G | E | T | L | K | R | A | A | D | E | K | G | V | L | L | S | V |
Template Known Secondary structure |   |
T |  |  |  |  | T |
| T | T |
|
|  |  |  |  |
| S |
| G | G | G |  |  |  |  |  |  |  |  |  |  | T | T | . |
|  |  |  |  |
| S | S |
|
| S | S |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |
|
|
|
|
|
|
|  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|