Job Description P0A821 Confidence 99.88% Date Thu Jan 5 11:06:39 GMT 2012 Rank 114 Aligned Residues 378 % Identity 12% Template c3fcrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative aminotransferase; PDBTitle: crystal structure of putative aminotransferase (yp_614685.1) from2 silicibacter sp. tm1040 at 1.80 a resolution Resolution 1.80 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.							.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.
Query Sequence		R	Q	M	L	D	E	A	R	E	V	I	R	G	S	Q	T	L	P	A	W	C	E	N	W	A	Q	E	V	D	A	R	L	T	K	E	A	Q	S	A	L	R	P	V	I	N	L	T	G	T	V	L	H	.	.	.	.	.	.	T	N	L	G	R	A	L	Q	A	E	A	A	V	E	A	V	A	Q	A	M	R	S
Query Conservation																																																						.	.	.	.	.	.
Alig confidence																	.	.																																				.	.	.	.	.	.								.	.
Template Conservation																	.	.																																																	.	.
Template Sequence		D	Q	L	D	Q	W	D	R	D	N	F	F	H	P	S	.	.	T	H	L	A	Q	H	A	R	G	E	S	A	N	R	V	I	K	T	A	S	G	V	F	I	E	D	R	D	G	T	K	L	L	D	A	F	A	G	L	Y	C	V	N	V	G	Y	G	R	.	.	Q	E	I	A	E	A	I	A	D	Q	A	R	E
Template Known Secondary structure															S	S	.	.	S								T		S										B	T					T	T							T	T					T			S		B			.	.
Template Predicted Secondary structure																	.	.																																																	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.										.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																														.	.																								.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.																								.	.	.	.	.	.	.	.	.
Query Sequence		P	V	T	L	E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	.	.	G	A	E	D	A	C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	A	T	A	.	.	.	.	.	.	.	.	.	S	G	K	E	V	V	V	S	R	G	E	L	V	E	I	G	G	A
Query Conservation																														.	.																								.	.	.	.	.	.	.	.	.
Alig confidence						.	.																							.	.																								.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation						.	.																																																																								.	.	.
Template Sequence		L	A	Y	Y	.	.	H	S	Y	V	G	H	G	T	E	A	S	I	T	L	A	K	X	I	L	D	R	A	P	K	N	X	S	K	V	Y	F	G	L	G	G	S	D	A	N	E	T	N	V	K	L	I	W	Y	Y	N	N	I	L	G	R	P	E	K	K	K	I	I	S	R	W	R	G	Y	H	G	S	.	.	.
Template Known Secondary structure			S			.	.				T	T																	S		T	T								S	S																			T	T		T	T								T	T					S	.	.	.
Template Predicted Secondary structure						.	.																																																																								.	.	.
Template SS confidence
		81	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.																												.	.	210	.	.	.	.	.					.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Query Sequence		F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	R	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	D	Y	R	Q	A	V	.	.	.	.	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Alig confidence		.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	G	L	V	T	G	S	L	T	G	L	E	L	F	H	K	K	F	D	L	P	V	E	Q	V	I	H	T	E	A	P	Y	Y	F	R	R	E	D	L	N	Q	T	E	E	Q	F	V	A	H	C	V	A	E	L	E	A	L	I	E	R	E	G	A	D	T	I	A	A	F	I	G	E	P	I	L	G	T	G	G
Template Known Secondary structure		.	.	S							S			G	G	G	T	T	T	T	T		S		T	T							S		G	G	G		S		T	T																							G	G	G								S	S	B	S	T	T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L	G	K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	G	G	P	Q	A	G	I	I	V	G	K	K	E	M	I
Query Conservation
Alig confidence																																									.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.
Template Sequence		I	V	P	P	P	A	G	Y	W	E	A	I	Q	T	V	L	N	K	H	D	I	L	L	V	A	D	E	V	V	T	G	F	G	R	L	G	T	X	F	.	.	.	.	.	.	G	S	D	H	Y	G	L	E	P	D	I	I	T	I	A	K	G	L	T	S	A	Y	A	P	L	S	G	S	I	V	S	D	K	V	W
Template Known Secondary structure			B				T	T													T								T	T	T	S	S	S	T	T	S	S	S		.	.	.	.	.	.						T				S						G	G	G	T	T	T	S	S
Template Predicted Secondary structure																																									.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.							.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320								.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.
Query Sequence		A	R	L	Q	S	H	P	L	.	.	.	.	.	.	.	K	R	A	L	R	A	D	K	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q	R	L	Q	A	P	L	A	A	H	Y	G	A	E	F	A	V
Query Conservation										.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	L	E	Q	G	T	D	E	N	G	P	I	G	H	G	W	T	Y	S	A	H	P	I	G	A	A	A	G	V	A	N	L	K	L	L	D	E	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	S	N	A	G	E	V	G	A	Y	L	N	A	T	X	A	E	A	L	S	Q	H	A	N	V
Template Known Secondary structure													S		S				T	T	T	T																		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					T	T	S	T	T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.															.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420								.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.																				.
Query SS confidence																																					.	.	.	.	.	.	.																				.
Query Sequence		Q	V	M	P	C	L	S	Q	I	G	S	G	S	L	P	V	D	R	L	P	S	A	A	L	T	F	T	P	H	D	G	R	G	S	H	.	.	.	.	.	.	.	L	E	S	L	A	A	R	W	R	E	L	P	V	P	V	I	G	R	I	.	Y	D	G	R	L	W	L	D	L	R	C	L	E	D	E	Q	R	F
Query Conservation																																					.	.	.	.	.	.	.																				.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																				.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	V	R	G	E	G	L	L	.	.	.	.	.	.	.	.	.	.	.	.	C	A	V	E	F	V	K	D	R	D	S	R	T	F	F	D	A	A	D	K	I	G	P	Q	I	S	A	K	L	L	E	Q	D	K	I	I	A	R	A	X	P	Q	G	D	I	L	G	F	A	P	P	F	C	L	T	R	A	E	A
Template Known Secondary structure							S	S	S		.	.	.	.	.	.	.	.	.	.	.	.							S	B	T	T	T	T	B				G	G	G																						S	S	S	S								T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		374	.	.	.	.	.	380	.	.													.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
		458	.	460	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Q	V	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		442	.	.	.