Job Description P0A821 Confidence 99.73% Date Thu Jan 5 11:06:39 GMT 2012 Rank 227 Aligned Residues 198 % Identity 14% Template c3f6tA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate aminotransferase; PDBTitle: crystal structure of aspartate aminotransferase (e.c. 2.6.1.1)2 (yp_194538.1) from lactobacillus acidophilus ncfm at 2.15 a3 resolution Resolution 2.15 Å

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		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140								.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.							.	.	.	.	.	.	170
Predicted Secondary structure																																							.	.	.	.	.	.	.																								.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.																								.	.	.	.	.	.
Query Sequence		A	V	E	A	V	A	Q	A	M	R	S	P	V	T	L	E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	.	.	.	.	.	.	.	I	T	G	A	E	D	A	C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	A	.	.	.	.	.	.	T	A	S	G	K	E	V
Query Conservation																																							.	.	.	.	.	.	.																								.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.																								.	.	.	.	.	.
Template Conservation
Template Sequence		R	D	K	V	V	A	E	W	V	N	G	A	V	A	N	N	Y	P	V	P	D	R	C	L	V	N	T	E	K	I	I	N	Y	F	L	Q	E	L	S	Y	K	D	A	N	L	A	E	Q	T	D	L	F	P	T	E	G	G	T	A	A	I	V	Y	A	F	H	S	L	A	E	N	H	L	L	K	K	G	D	K	I
Template Known Secondary structure															T		S			S	S	S	S																		T	T	T				G	G	G																							T	T	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.							.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.
Query Sequence		V	V	S	R	G	E	L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	R	.	.	.	.	.	.	T	H	A	N	D	Y	R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L
Query Conservation																																					.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.																				.	.	.	.	.	.																																		.
Template Conservation												.	.	.	.	.	.																																																											.
Template Sequence		A	I	N	E	P	I	F	T	P	Y	.	.	.	.	.	.	L	R	I	P	E	L	K	D	Y	E	L	V	E	V	D	L	H	S	Y	E	K	N	D	W	E	I	E	P	N	E	I	E	K	L	K	D	P	S	I	K	A	L	I	V	V	N	P	T	N	P	T	S	K	E	F	D	T	N	.	A	L	N	A	I
Template Known Secondary structure					S	S						.	.	.	.	.	.		T	S	G	G	G	G	G	S											T	T	T	T	S											S		T	T								S	S		T	T	T		B						.
Template Predicted Secondary structure												.	.	.	.	.	.																																																											.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.							.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.
		245	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		V	A	L	G	K	E	L	.	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	G	G	P	Q	A	G	I	I	V	G	K	K	E	M	I	A	R	L
Query Conservation									.
Alig confidence									.																.	.	.	.	.	.																						.
Template Conservation																									.	.	.	.	.	.																						.
Template Sequence		K	Q	A	V	E	K	N	P	K	L	X	I	I	S	D	E	V	Y	G	A	F	V	P	.	.	.	.	.	.	N	F	K	S	I	Y	S	V	V	P	Y	N	T	X	L	V	Y	S	Y	S	L	.	F	G	C	T	G	W	R	L	G	V	I	A	L	N	E	K	N	V	F	D	D
Template Known Secondary structure									T	T								T	T	G	G	G	S	T	.	.	.	.	.	.	T								S	G	G	G										.		S		G	G	G									S	S
Template Predicted Secondary structure																									.	.	.	.	.	.																						.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.							.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions