Job Description P0A821 Confidence 99.88% Date Thu Jan 5 11:06:39 GMT 2012 Rank 112 Aligned Residues 330 % Identity 11% Template c3f0hA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase; PDBTitle: crystal structure of aminotransferase (rer070207000802) from2 eubacterium rectale at 1.70 a resolution Resolution 1.70 Å

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.					.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.
Predicted Secondary structure																																																						.	.	.	.																						.
Query SS confidence																																																						.	.	.	.																						.
Query Sequence		T	N	L	G	R	A	L	Q	A	E	A	A	V	E	A	V	A	Q	A	M	R	S	P	V	T	L	E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	A	.	.	.	.	E	D	A	C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	A	T	A	.	S	G
Query Conservation																																																						.	.	.	.																						.
Alig confidence																														.	.	.	.	.	.	.																		.	.	.	.																						.
Template Conservation																														.	.	.	.	.	.	.
Template Sequence		F	T	V	G	P	V	X	S	S	E	E	V	R	A	I	G	A	E	Q	V	P	Y	F	R	T	T	E	F	.	.	.	.	.	.	.	S	S	T	X	L	E	N	E	K	F	X	L	E	Y	A	K	A	P	E	G	S	K	A	V	F	X	T	C	S	S	T	G	S	X	E	A	V	V	X	N	C	F	T	K	K
Template Known Secondary structure			S	S	S	S												T	S						S	S				.	.	.	.	.	.	.																T			T	T							S	S																T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.								.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		K	E	V	V	V	S	R	G	E	L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	R	.	.	T	H	A	N	D	Y	R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V
Query Conservation																																								.	.
Alig confidence															.	.	.	.																						.	.																															.	.	.	.
Template Conservation															.	.	.	.																																																						.	.	.	.
Template Sequence		D	K	V	L	V	I	D	G	G	S	F	G	H	.	.	.	.	R	F	V	Q	L	C	E	I	H	E	I	P	Y	V	A	L	K	L	E	H	G	K	K	L	T	K	E	K	L	Y	E	Y	D	N	Q	N	F	T	G	L	L	V	N	V	D	E	T	S	T	A	V	L	Y	.	.	.	.	D	T	X	X	I	G
Template Known Secondary structure									S	S					.	.	.	.									T	T										T	T										T	T	T	T	S									S			T	T	T	T				.	.	.	.
Template Predicted Secondary structure															.	.	.	.																																																						.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.					90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	G	K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	G	G	P	Q	A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	P	L	K	R	A	L	R
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	F	C	K	K	N	N	X	F	F	V	C	D	C	V	S	A	F	L	A	D	P	F	.	.	.	.	.	.	.	.	.	.	.	N	X	N	E	C	G	A	D	V	X	I	T	G	S	Q	V	L	A	C	P	P	G	I	S	V	I	V	L	A	P	R	G	V	E	R	V	E	K	S	K	V	R	T	X	Y	F
Template Known Secondary structure							T	T								T	T	T	T	T	T	S			.	.	.	.	.	.	.	.	.	.	.						T		S													S	S																T						S	T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.												.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	K	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q	R	L	Q	A	P	L	A	A	H	Y	G	A	E	F	A	V	Q	V	M	P	C	L	S	Q	I	G	S	G	S	L	P	V	D	R	L	P
Query Conservation
Alig confidence																																																																										.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		D	L	K	D	A	L	K	N	Q	E	R	G	Q	T	P	F	T	P	A	V	G	I	L	L	Q	I	N	E	R	L	K	E	I	K	K	H	G	G	A	D	A	E	V	A	R	I	A	S	Q	A	A	D	F	R	A	K	I	K	D	L	P	F	E	L	V	S	E	S	P	A	N	G	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T	T			S	S																				T	T																				T	T	T	S	S						S	S	B	B	T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.		.	430	.	.	.	.	.	.	.	.				.	440	.	.	.	.	.	.	.	.	.				450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure																									.											.	.	.												.	.	.
Query SS confidence																									.											.	.	.												.	.	.
Query Sequence		S	A	A	L	T	F	T	P	H	D	G	R	G	S	H	L	E	S	L	A	A	R	W	.	R	E	L	P	V	P	V	I	G	R	.	.	.	I	Y	D	G	R	L	W	L	D	L	R	.	.	.	C	L	E	D	E	Q	R	F	L	E	M	L
Query Conservation																									.											.	.	.												.	.	.
Alig confidence		.	.	.	.	.																			.											.	.	.												.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	V	T	S	V	H	P	T	T	A	N	A	Y	D	I	F	L	K	L	K	D	E	Y	G	I	W	I	C	P	N	G	G	E	X	K	D	T	I	F	R	V	G	H	I	G	A	L	T	H	E	D	N	T	T	L	V	N	A	F
Template Known Secondary structure		.	.	.	.	.							S	S	S													S	S								G	G	G	T	T	T								S	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions