Job Description P0A821 Confidence 99.76% Date Thu Jan 5 11:06:39 GMT 2012 Rank 217 Aligned Residues 307 % Identity 14% Template c3ez1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase mocr family; PDBTitle: crystal structure of putative aminotransferase (mocr family)2 (yp_604413.1) from deinococcus geothermalis dsm 11300 at 2.60 a3 resolution Resolution 2.60 Å

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		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.															.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																												.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	A	.	.	E	D	A	C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	S	G	K	E	V	V	V	S	R	G	E	L	V	E	I	G	G
Query Conservation																												.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.													.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation											.	.	.	.	.																																																																	.	.
Template Sequence		Y	P	G	G	V	A	G	L	P	.	.	.	.	.	S	A	R	A	L	F	A	G	Y	L	D	V	K	A	E	N	V	L	V	W	N	N	S	S	L	E	L	Q	G	L	V	L	T	F	A	L	L	H	G	V	R	G	S	T	G	P	W	L	S	Q	T	P	K	X	I	V	T	V	P	G	Y	D	R	H	.	.
Template Known Secondary structure		S		S		T	T				.	.	.	.	.										T	T	S		G	G	G					S	S																T			T	T		S	S		G	G	G	G									S						.	.
Template Predicted Secondary structure											.	.	.	.	.																																																																	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.						.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																							.																	.	.							.																							.
Query SS confidence																							.																	.	.							.																							.
Query Sequence		A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	.	N	R	T	H	A	N	D	Y	R	Q	A	V	N	E	N	T	.	.	A	L	L	M	K	V	.	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L	.	G	K	E	L	D	V	P	V	V	T
Query Conservation																							.																	.	.							.																							.
Alig confidence		.	.	.	.																		.																	.	.							.														.									.
Template Conservation		.	.	.	.																																																									.
Template Sequence		.	.	.	.	F	L	L	L	Q	T	L	G	F	E	L	L	T	V	D	X	Q	S	D	G	P	D	V	D	A	V	E	R	L	A	G	T	D	P	S	V	K	G	I	L	F	V	P	T	Y	S	N	P	G	G	E	T	I	S	L	E	.	K	A	R	R	L	A	G	L	Q	A	A	A	P	D	F	T	I	F	A
Template Known Secondary structure		.	.	.	.								T										T	T													S		T	T								S	S	S		T	T	T								.							T				S	S	T	T
Template Predicted Secondary structure		.	.	.	.																																																									.
Template SS confidence
						137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.				.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																													.	.	.															.
Query SS confidence																													.	.	.															.
Query Sequence		D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	.	.	.	G	V	S	L	V	S	F	S	G	D	K	L	L	G	.	G	P	Q	A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	P	L	K	R	A	L	R	A	D	K	M	T	L	A	A
Query Conservation																													.	.	.															.
Alig confidence																													.	.	.															.
Template Conservation
Template Sequence		D	D	A	Y	R	V	H	H	L	V	E	E	D	R	A	E	P	V	N	F	V	V	L	A	R	D	A	G	Y	P	D	R	A	F	V	F	A	S	T	S	K	I	T	F	A	G	A	G	L	G	F	V	A	S	S	E	D	N	I	R	W	L	S	K	Y	L	G	A	Q	S	I	G	P	N	K	V	E	Q	A	R
Template Known Secondary structure				T	T	S	S		B			S	S	S															T		T	T	S							S	T	T	T	S		S	S	S	S																					S		S
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q	R	L	Q	A	P	L	A	A	H	Y	G	A	E	F	A	V	Q	V	M	P	C	L	S	Q	I	G	S	G	S	L	P	V	D	R	L	P	S	A	A	L	T	F	T	P
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	V	K	F	L	T	E	Y	P	G	G	L	.	.	.	.	.	.	.	.	E	G	L	X	R	D	H	A	A	I	I	A	P	K	F	R	A	V	D	E	V	L	R	A	E	L	G	E	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Y	A	T	W	T	L	P	K	G	G	Y	F	I	S	L
Template Known Secondary structure									S	T	T			.	.	.	.	.	.	.	.																											T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S							S	B	S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.									.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.															.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.										.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.
Query Sequence		H	D	G	R	G	S	H	L	E	S	L	A	A	R	W	R	E	L	P	V	P	V	I	.	.	.	.	.	.	.	.	.	G	R	I	Y	D	G	R	L	W	L	D	L	R	C	L	E	D	E	Q	R	F	L	E	M	L
Query Conservation																									.	.	.	.	.	.	.	.	.
Alig confidence							.																		.	.	.	.	.	.	.	.	.													.
Template Conservation							.																																							.
Template Sequence		D	T	A	E	P	.	V	A	D	R	V	V	K	L	A	E	A	A	G	V	S	L	T	P	A	G	A	T	Y	P	A	G	Q	D	P	H	N	R	N	L	R	L	A	P	.	T	R	P	P	V	E	E	V	R	T	A	X
Template Known Secondary structure				S	S	S	.												T	T						T	T	T	T	S	S	T	T			S	S	S								.	S	S	S
Template Predicted Secondary structure							.																																							.
Template SS confidence
		350	.	.	.	.		.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.		.	.	.	.	.	.	.	400	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions