Job Description P0A821 Confidence 99.84% Date Thu Jan 5 11:06:39 GMT 2012 Rank 158 Aligned Residues 314 % Identity 17% Template c3eucB_ PDB info PDB header:transferase Chain: B: PDB Molecule:histidinol-phosphate aminotransferase 2; PDBTitle: crystal structure of histidinol-phosphate aminotransferase2 (yp_297314.1) from ralstonia eutropha jmp134 at 2.05 a resolution Resolution 2.05 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																															.	.	.
Query SS confidence																																																															.	.	.
Query Sequence		N	L	T	G	T	V	L	H	T	N	L	G	R	A	L	Q	A	E	A	A	V	E	A	V	A	Q	A	M	R	S	P	V	T	L	E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	A	E	.	.	.	D	A	C	I	V	N	N	N	A	A	A	V	L	L	M	L
Query Conservation																																																															.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	S	H	G	L	V	K	L	D	A	X	E	N	Y	R	L	P	P	A	L	R	S	E	L	A	A	R	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	S	S	E	A	L	R	A	K	L	K	E	V	X	Q	V	P	A	G	X	E	V	L	L	G	N	G	S	D	E	I	I	S	X	L	A
Template Known Secondary structure				T	T	S				S	S	S																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																T			T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.															.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		162	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure						.																																														.	.	.
Query SS confidence						.																																														.	.	.
Query Sequence		A	A	T	A	.	S	G	K	E	V	V	V	S	R	G	E	L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	R	T	H	A	N	D	.	.	.	Y	R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K
Query Conservation						.																																														.	.	.
Alig confidence						.																.	.	.	.	.	.																									.	.	.
Template Conservation																						.	.	.	.	.	.
Template Sequence		L	A	A	A	R	P	G	A	K	V	X	A	P	V	P	G	F	V	X	Y	.	.	.	.	.	.	A	X	S	A	Q	F	A	G	L	E	F	V	G	V	P	L	R	A	D	F	T	L	D	R	G	A	X	L	A	A	X	A	E	H	Q	P	A	I	V	Y	L	A	Y	P	N	N	P	T	G	N	L	F	D	A
Template Known Secondary structure				T			T	T								S						.	.	.	.	.	.							T	T										T	T																		S						S	S		T	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.							.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		A	I	D	E	A	E	L	V	A	L	G	K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	.	L	L	G	G	P	Q	A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q
Query Conservation																																																												.
Alig confidence			.																										.	.	.	.	.	.																										.
Template Conservation			.																										.	.	.	.	.	.
Template Sequence		A	.	D	X	E	A	I	V	R	A	A	Q	G	S	V	C	R	S	L	V	V	V	D	E	A	Y	Q	.	.	.	.	.	.	P	F	A	Q	E	S	W	X	S	R	L	T	D	F	G	N	L	L	V	X	R	T	V	S	K	L	G	L	A	G	I	R	L	G	Y	V	A	G	D	P	Q	W	L	E	Q	L	D
Template Known Secondary structure			.									T	B	T	T	S		B								T	T		.	.	.	.	.	.		S	S	S			S	G	G	G	G	G	T		T	T										T	T		S	S																	G
Template Predicted Secondary structure			.																										.	.	.	.	.	.
Template SS confidence
		176		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.							.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	P	L	K	R	A	L	R	A	D	K	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q	R	L	Q	A	P	L	A	A	H	Y	G	A	E	F	A	V	Q	V	M	P	C	L	S	Q	I	G	S
Query Conservation
Alig confidence				.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.
Template Conservation				.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.
Template Sequence		K	V	.	.	R	P	P	Y	N	V	N	V	L	T	E	A	T	A	L	F	A	L	E	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	V	L	D	E	Q	A	A	Q	L	R	A	E	R	S	R	V	A	E	G	X	A	A	H	G	G	V	T	V	F	P	S	A	A	N	F	.	.
Template Known Secondary structure		G	G	.	.	S		T	T		S													T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								T	S	T	T							S	S	S		.	.
Template Predicted Secondary structure				.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.
Template SS confidence
		249	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270																		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.						.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																																												.	.	.	.	.
Query SS confidence																																												.	.	.	.	.
Query Sequence		G	S	L	P	V	D	R	L	P	S	A	A	L	T	F	T	P	H	D	G	R	G	S	H	L	E	S	L	A	A	R	W	R	E	L	P	V	P	V	I	G	R	.	.	.	.	.	I	Y	D	G	R	L	W	L	D	L	R	C	L	E	D	E	Q	R	F	L	E	M	L	L	K
Query Conservation																																												.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.																				.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	L	L	A	R	V	P	.	.	.	.	.	D	A	A	Q	T	F	D	R	L	L	A	R	K	V	L	I	K	N	V	S	K	X	H	P	L	L	A	N	C	L	R	V	T	V	S	T	P	E	E	N	A	Q	F	L	E	A	F	A	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.						S	.	.	.	.	.												T	T							T	T	S		G	G	G	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Template SS confidence
														308	.	310	.	.	.						.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions