Job Description P0A821 Confidence 99.77% Date Thu Jan 5 11:06:39 GMT 2012 Rank 216 Aligned Residues 326 % Identity 10% Template c3e77A_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: human phosphoserine aminotransferase in complex with plp Resolution 2.50 Å

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.						.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.																					.	.	.								.														.	.
Query SS confidence																															.	.	.	.	.																					.	.	.								.														.	.
Query Sequence		R	A	L	Q	A	E	A	A	V	E	A	V	A	Q	A	M	R	S	P	V	T	L	E	Y	D	L	D	D	A	.	.	.	.	.	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	A	E	.	.	.	D	A	C	I	V	N	N	.	N	A	A	A	V	L	L	M	L	A	A	T	A	.	.
Query Conservation																															.	.	.	.	.																					.	.	.								.														.	.
Alig confidence																															.	.	.	.	.																					.	.	.								.														.	.
Template Conservation
Template Sequence		Q	S	M	L	P	H	S	V	L	L	E	I	Q	K	E	L	L	D	Y	K	G	V	G	I	S	V	L	E	M	S	H	R	S	S	D	F	A	K	I	I	N	N	T	E	N	L	V	R	E	L	L	A	V	P	D	N	Y	K	V	I	F	L	Q	G	G	G	C	G	Q	F	S	A	V	P	L	N	L	I	G	L
Template Known Secondary structure		S														T	S	S	S	G	G	G	S	S	S		T	T	T			T	T	S																			T			T	T							S	S														G	G	G
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
			166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure		.																																								.	.
Query SS confidence		.																																								.	.
Query Sequence		.	S	G	K	E	V	V	V	S	R	G	E	L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	.	.	R	T	H	A	N	D	Y	R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A
Query Conservation		.																																								.	.
Alig confidence		.																.	.	.	.																					.	.																																	.	.	.	.	.	.
Template Conservation																		.	.	.	.																																																							.	.	.	.	.	.
Template Sequence		K	A	G	R	C	A	D	Y	V	V	T	G	A	W	S	A	.	.	.	.	K	A	A	E	E	A	K	K	F	G	T	I	N	I	V	H	P	K	L	G	S	Y	T	K	I	P	D	P	S	T	W	N	L	N	P	D	A	S	Y	V	Y	Y	C	A	N	E	T	V	H	G	V	E	F	D	.	.	.	.	.	.
Template Known Secondary structure		S	T	T									S					.	.	.	.							T	T	T	S						S				S	S	S		S				G	G	G					T	T		S						S			T	T	T	T				S	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.																																																							.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	V	A	L	G	K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	G	G	P	Q	A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	P	L	K	R
Query Conservation
Alig confidence		.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	F	I	P	D	V	K	G	A	V	L	V	C	D	M	S	S	N	F	L	S	K	P	V	D	V	S	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	I	F	A	G	A	Q	K	N	V	G	S	A	G	V	T	V	V	I	V	R	D	D	L	L	G	F	A	L	R	E	C	P	S	V
Template Known Secondary structure		.	.	.	S					T	T								T	T	T	T	T	S	S				G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	S						G	G	G	T	T	S		T	T								T	T	S		S				T	T	S		G	G
Template Predicted Secondary structure		.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.														.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		A	L	R	A	D	K	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	.	.	A	E	V	I	Q	I	Q	A	Q	R	L	Q	A	P	L	A	A	H	Y	G	A	E	F	A	V	Q	V	M	P	C	L	S	Q	I	G	S	G	S	L	P
Query Conservation																																								.	.
Alig confidence				.	.	.	.																																	.	.																																								.
Template Conservation				.	.	.	.																																																																										.
Template Sequence		L	E	.	.	.	.	Y	K	V	Q	A	G	N	S	S	L	Y	N	T	P	P	C	F	S	I	Y	V	M	G	L	V	L	E	W	I	K	N	N	G	G	A	A	A	M	E	K	L	S	S	I	K	S	Q	T	I	Y	E	I	I	D	N	S	Q	G	F	Y	V	C	P	V	E	P	Q	N	R	S	K	M	N	.
Template Known Secondary structure		G		.	.	.	.						T	T	T	T		S	S																				T	T																						T	S	T	T	S					S		G	G	G	B		S	S		.
Template Predicted Secondary structure				.	.	.	.																																																																										.
Template SS confidence
		228	.					230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.			.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.		.	.	.	.	.	.	.				.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure																							.	.																					.								.	.	.
Query SS confidence																							.	.																					.								.	.	.
Query Sequence		V	D	R	L	P	S	A	A	L	T	F	T	P	H	D	G	R	G	S	H	L	.	.	E	S	L	A	A	R	W	R	E	L	P	V	P	V	I	G	R	I	Y	D	.	G	R	L	W	L	D	L	.	.	.	R	C	L	E	D	E	Q	R	F	L	E	M	L
Query Conservation																							.	.																					.								.	.	.
Alig confidence		.	.	.	.	.	.	.	.														.	.																					.								.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	I	P	F	R	I	G	N	A	K	G	D	D	A	L	E	K	R	F	L	D	K	A	L	E	L	N	M	L	S	L	K	G	H	R	S	V	G	G	I	R	A	S	L	Y	N	A	V	T	I	E	D	V	Q	K	L	A	A	F	M
Template Known Secondary structure		.	.	.	.	.	.	.	.						S	S	T	T																T	T			S		B			T	T	T		S							T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions