Job Description P0A821 Confidence 99.80% Date Thu Jan 5 11:06:39 GMT 2012 Rank 206 Aligned Residues 351 % Identity 16% Template c3dydB_ PDB info PDB header:transferase Chain: B: PDB Molecule:tyrosine aminotransferase; PDBTitle: human tyrosine aminotransferase Resolution 2.30 Å

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.								.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.
Query Sequence		T	K	E	A	Q	S	A	L	R	P	V	I	N	L	T	G	T	V	L	H	T	N	L	G	R	A	L	Q	A	E	A	A	V	E	A	V	A	Q	A	M	R	S	P	V	T	L	E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	.	.	.	.	.	.	.	A	E
Query Conservation																																																																									.	.	.	.	.	.	.
Alig confidence																	.																																								.	.	.	.	.												.	.	.	.	.	.	.
Template Conservation																	.																																								.	.	.	.	.
Template Sequence		S	D	V	K	P	N	P	N	K	T	M	I	S	L	S	.	I	G	D	P	T	V	F	G	N	L	P	T	D	P	E	V	T	Q	A	M	K	D	A	L	D	S	G	K	Y	N	G	Y	A	P	S	I	G	F	L	.	.	.	.	.	S	S	R	E	E	I	A	S	Y	Y	H	C	P	E	A	P	L	E	A	K
Template Known Secondary structure								T	T	S					S		.				T	T	T	T	S	S	S																	T		S	S	S				T	T				.	.	.	.	.												B	T	T	B				G	G
Template Predicted Secondary structure																	.																																								.	.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																																													.	.	.	.
Query SS confidence																																																													.	.	.	.
Query Sequence		D	A	C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	A	T	A	S	G	K	E	V	V	V	S	R	G	E	L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	.	.	.	.	R	T	H	A	N	D	Y	R	Q	A	V	N	E	N	T	A	L
Query Conservation																																																													.	.	.	.
Alig confidence																													.	.	.	.	.																												.	.	.	.
Template Conservation																													.	.	.	.	.
Template Sequence		D	V	I	L	T	S	G	C	S	Q	A	I	D	L	C	L	A	V	L	A	N	P	G	Q	N	I	L	.	.	.	.	.	V	P	R	P	G	F	S	L	Y	K	T	L	A	E	S	M	G	I	E	V	K	L	Y	N	L	L	P	E	K	S	W	E	I	D	L	K	Q	L	E	Y	L	I	D	E	K	T	A	C
Template Known Secondary structure		G					S																T	T					.	.	.	.	.				S			T									T	T										G	G	G	T	T													T	T
Template Predicted Secondary structure																													.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.						.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L	G	K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	G	G	P	Q
Query Conservation
Alig confidence																			.																																			.	.	.	.
Template Conservation																			.																																			.	.	.	.
Template Sequence		L	I	V	N	N	P	S	N	P	C	G	S	V	F	S	K	R	.	H	L	Q	K	I	L	A	V	A	A	R	Q	C	V	P	I	L	A	D	E	I	Y	G	D	M	V	F	S	D	C	K	Y	E	P	.	.	.	.	L	A	T	L	S	T	D	V	P	I	L	S	C	G	G	L	A	K	R	W	L	V	P	G
Template Known Secondary structure						S	S		T	T	T								.													T								T	T	T	T		B		S	S	S					.	.	.	.	G	G	G	G		S	S									S	T	T	T	T	T		G	G
Template Predicted Secondary structure																			.																																			.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.					.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
				302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	P	L	K	R	A	L	R	A	D	K	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q	R	L	Q	A	P	L	A	A	H	Y
Query Conservation		.	.
Alig confidence		.	.																		.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.
Template Sequence		W	R	L	G	W	I	L	I	H	D	R	R	D	I	F	G	N	E	I	.	.	.	.	.	.	.	.	.	R	D	G	L	V	K	L	S	Q	R	I	L	G	P	C	T	I	V	Q	G	A	L	K	S	I	L	C	R	T	P	G	E	F	Y	H	N	T	L	S	F	L	K	S	N	A	D	L	C	Y	G	A	L
Template Known Secondary structure		G											T	T	S	S					.	.	.	.	.	.	.	.	.														S															S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.										.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.						440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.
Query Sequence		G	A	E	F	A	V	Q	V	M	P	C	L	S	Q	I	G	S	G	S	L	P	V	D	R	L	P	S	A	A	L	T	F	T	P	H	D	G	R	G	S	H	L	E	S	L	A	A	R	W	R	E	L	P	V	P	V	I	G	R	I	.	.	.	.	.	Y	D	G	R	L	W	L	D	L	R	C	L	E	D	E
Query Conservation																																																														.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.																									.									.	.	.	.	.												.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.																									.																									.	.
Template Sequence		A	A	I	P	G	L	R	P	V	R	P	S	G	A	M	Y	L	.	.	.	.	.	.	.	.	.	.	M	V	G	I	E	M	E	H	F	P	E	F	E	N	D	V	E	F	T	E	R	L	V	A	.	E	Q	S	V	H	C	L	P	A	T	C	F	E	Y	P	N	F	I	R	V	V	I	T	V	.	.	P	E
Template Known Secondary structure			T	S	T	T								B	T	T			.	.	.	.	.	.	.	.	.	.						G	G	G		T	T		S	S											.									G	G	G	G	T		T	T						S		S	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.																									.																									.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.											.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.			.	.
		455	.	.	.	.	460	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	F	L	E	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	M	M	L	E	A	C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		425	.	.	.	.	430	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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