Job Description P0A821 Confidence 99.79% Date Thu Jan 5 11:06:39 GMT 2012 Rank 208 Aligned Residues 306 % Identity 13% Template c3d6kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative aminotransferase; PDBTitle: the crystal structure of a putative aminotransferase from2 corynebacterium diphtheriae Resolution 2.00 Å

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		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.																.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																													.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	A	.	.	E	D	A	C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	A	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	K	E	V	V	V	S	R	G	E	L	V	E	I
Query Conservation																													.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.													.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.
Template Sequence		R	N	Y	G	G	L	L	G	I	A	.	.	.	.	.	D	I	R	E	L	W	A	E	A	L	G	L	P	A	D	L	V	V	A	Q	D	G	S	S	L	N	I	X	F	D	L	I	S	W	S	Y	T	W	G	N	N	D	S	S	R	P	W	S	A	E	E	K	V	K	W	L	C	P	V	P	G	Y	D	R	H
Template Known Secondary structure		T	S	S			S	S				.	.	.	.	.											T			G	G	G					S	S																			T	T		S	S		G	G	G	S	S									S
Template Predicted Secondary structure												.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.						.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.
Predicted Secondary structure																										.																									.	.																								.
Query SS confidence																										.																									.	.																								.
Query Sequence		G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	.	R	T	H	A	N	D	Y	R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	T	S	.	.	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L	G	K	E	L	.	D	V	P	V	V
Query Conservation																										.																									.	.																								.
Alig confidence		.	.	.	.	.	.																			.																									.	.											.													.
Template Conservation		.	.	.	.	.	.																																																								.
Template Sequence		.	.	.	.	.	.	F	T	I	T	E	H	F	G	F	E	X	I	N	V	P	X	T	D	E	G	P	D	X	G	V	V	R	E	L	V	K	D	P	Q	V	K	G	X	W	T	V	P	V	F	G	N	P	T	G	V	T	F	S	E	Q	.	T	C	R	E	L	A	E	X	S	T	A	A	P	D	F	R	I	V
Template Known Secondary structure		.	.	.	.	.	.							T	T										T	T											T	T	S	T	T									S	S		T	T	T								.											S	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.																																																								.
Template SS confidence
								142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																				.	.																						.
Query SS confidence																				.	.																						.
Query Sequence		T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	.	.	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	.	L	L	G	G	P	Q	A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	P	L	K	R	A	L	R	A	D	K	M	T	L	A	A
Query Conservation																				.	.																						.
Alig confidence																				.	.																						.
Template Conservation
Template Sequence		W	D	N	A	Y	A	L	H	T	L	S	D	E	F	P	I	V	H	N	V	I	E	F	A	Q	A	A	G	N	P	N	R	F	W	F	X	S	S	T	S	K	I	T	H	A	G	S	G	V	S	F	F	A	S	S	K	E	N	I	E	W	Y	A	S	H	A	N	V	R	G	I	G	P	N	K	L	N	Q	L	A
Template Known Secondary structure					T	T	T	T		B	S	S	S																T		T	T								S	T	T	T	S		T	T	S	S																							S
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q	R	L	Q	A	P	L	A	A	H	Y	G	A	E	F	A	V	Q	V	M	P	C	L	S	Q	I	G	S	G	S	L	P	V	D	R	L	P	S	A	A	L	T	F	T	P
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	A	Q	F	F	.	.	.	.	.	.	.	.	.	G	D	V	A	G	L	K	A	H	X	L	K	H	A	A	S	L	A	P	K	F	E	R	V	L	E	I	L	D	S	R	L	S	E	Y	G	V	A	K	W	T	S	P	T	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	F	I	S	V	D	V
Template Known Secondary structure							.	.	.	.	.	.	.	.	.		S																															G	G	G		S							S	B	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		295	.	.	.	.										300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.														.	.	.	.	350	.	.
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.										.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.
Query Sequence		H	D	G	R	G	S	H	L	E	S	L	A	A	R	W	R	E	L	P	V	P	V	I	G	R	.	.	.	.	.	.	.	.	.	I	Y	D	G	R	L	W	L	D	L	R	C	L	E	D	E	Q	R	F	L	E	M	L
Query Conservation																											.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																							.	.	.	.	.	.	.	.	.											.
Template Conservation		.	.	.																																										.
Template Sequence		.	.	.	V	P	G	T	A	S	R	V	V	E	L	A	K	E	A	G	I	A	L	T	G	A	G	S	S	F	P	L	H	N	D	P	N	N	E	N	I	R	L	A	P	.	S	L	P	P	V	A	E	L	E	V	A	X
Template Known Secondary structure		.	.	.	S	T	T												T	T						T	T	T	T	S	G	G	G			T	T	S								.	S	S	S
Template Predicted Secondary structure		.	.	.																																										.
Template SS confidence
					353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.		.	.	.	.	.	.	400	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions