Job Description P0A821 Confidence 99.56% Date Thu Jan 5 11:06:39 GMT 2012 Rank 235 Aligned Residues 295 % Identity 13% Template c3bwnF_ PDB info PDB header:transferase Chain: F: PDB Molecule:l-tryptophan aminotransferase; PDBTitle: l-tryptophan aminotransferase Resolution 2.25 Å

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		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.									.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.						170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.																													.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.																													.	.	.	.	.
Query Sequence		E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	.	.	.	.	.	.	.	.	T	G	A	E	D	A	C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	A	T	A	S	G	K	E	.	.	.	.	.	V	V	V	S	R	G	E	L	V	E	I	G	G	A	F	R
Query Conservation																									.	.	.	.	.	.	.	.																													.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.																													.	.	.	.	.												.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		Y	F	S	D	M	T	N	L	C	W	F	L	E	P	E	L	E	D	A	I	K	D	L	H	G	V	V	G	N	A	A	T	E	D	R	Y	I	V	V	G	T	G	S	T	Q	L	C	Q	A	A	V	H	A	L	S	S	L	A	R	S	Q	P	V	S	V	V	A	A	A	P	F	Y	S	T	Y	.	.	.	.	.
Template Known Secondary structure		S		S		T	T	S	S	S	T	T	S																	S	B			T	T	S																							S	S	S	S	S							S	S						.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	R	T	H	A	N	D	Y	R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L	G	K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V
Query Conservation
Alig confidence		.																			.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																			.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	V	E	E	T	T	Y	V	R	S	G	M	Y	K	W	E	G	D	A	.	.	.	.	.	.	.	W	G	F	D	K	K	G	P	Y	I	E	L	V	T	S	P	N	N	P	D	G	T	I	R	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	A	K	V	I	H	D	F	A	Y	Y	W	P	H
Template Known Secondary structure		.						T	T			T	T							S	.	.	.	.	.	.	.	T	T				S	S								S	S		T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.										T	T		S	T	T
Template Predicted Secondary structure		.																			.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150								.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.														.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	G	G	P	Q	A	G	I	.	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	P	L	K	R	A	L	R	A	D	K	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P
Query Conservation																																									.
Alig confidence					.	.	.	.	.	.	.	.	.																												.
Template Conservation					.	.	.	.	.	.	.	.	.
Template Sequence		Y	T	P	.	.	.	.	.	.	.	.	.	I	T	R	R	Q	D	H	D	I	M	L	F	T	F	S	K	I	T	G	H	A	G	S	R	I	G	W	A	L	V	K	D	K	E	V	A	K	K	M	V	E	Y	I	I	V	N	S	I	G	V	S	K	E	S	Q	V	R	T	A	K	I	L	N	V	L	K	E	T
Template Known Secondary structure		T	S		.	.	.	.	.	.	.	.	.			S		B			S													G	G	G																									S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.
Template SS confidence
		199	200	.										.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q	R	L	Q	A	P	L	A	A	H	Y	G	A	E	F	A	V	Q	V	M	P	C	L	S	Q	I	G	S	G	S	L	P	V	D	R	L	P	S	A	A	L	T	F	T	P	H	D	G	R	G	S	H	L	E	S	L
Query Conservation
Alig confidence											.	.																													.	.	.	.	.	.
Template Conservation											.	.																													.	.	.	.	.	.
Template Sequence		C	K	S	E	S	E	S	E	N	.	.	F	F	K	Y	G	R	E	M	M	K	N	R	W	E	K	L	R	E	V	V	K	E	S	D	A	F	T	L	.	.	.	.	.	.	P	K	Y	P	E	A	F	C	N	Y	F	G	K	S	L	E	S	Y	P	A	F	A	W	L	G	T	K	E	E	T	D	L	V	S	E
Template Known Secondary structure			T			S	T	T	T	S	.	.																						T	S	S	S				.	.	.	.	.	.									T	T	T	T								S							S	S	S
Template Predicted Secondary structure											.	.																													.	.	.	.	.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.							.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		425	.	.	.	.	430	.	.	.	.	.	.	.	.							.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.		.	.	.	.	.	460	.
Predicted Secondary structure																.	.	.	.	.	.																	.
Query SS confidence																.	.	.	.	.	.																	.
Query Sequence		A	A	R	W	R	E	L	P	V	P	V	I	G	R	.	.	.	.	.	.	I	Y	D	G	R	L	W	L	D	L	R	C	L	E	D	E	.	Q	R	F	L	E	M	L
Query Conservation																.	.	.	.	.	.																	.
Alig confidence							.	.	.	.	.					.	.	.	.	.	.																	.
Template Conservation							.	.	.	.	.
Template Sequence		L	R	R	H	K	.	.	.	.	.	V	M	S	R	A	G	E	R	C	G	S	D	K	K	H	V	R	V	S	M	L	S	R	E	D	V	F	N	V	F	L	E	R	L
Template Known Secondary structure				T	T	T	.	.	.	.	.						T	G	G	G	T	S		T	T						S		S
Template Predicted Secondary structure							.	.	.	.	.
Template SS confidence
		342	.	.	.	.						.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions