Job Description P0A821 Confidence 99.90% Date Thu Jan 5 11:06:39 GMT 2012 Rank 91 Aligned Residues 306 % Identity 17% Template c2zsmA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-2 aminomutase from aeropyrum pernix, hexagonal form Resolution 2.30 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																																										.								.	.	.
Query SS confidence																																																										.								.	.	.
Query Sequence		E	L	L	R	Q	M	L	D	E	A	R	E	V	I	R	G	S	Q	T	L	P	A	W	C	E	N	W	A	Q	E	V	D	A	R	L	T	K	E	A	Q	S	A	L	R	P	V	I	N	L	T	G	T	V	L	H	T	.	N	L	G	R	A	L	Q	.	.	.	A	E	A	A	V	E	A	V	A	Q	A	M	R
Query Conservation																																																										.								.	.	.
Alig confidence																											.	.	.																													.								.	.	.
Template Conservation																											.	.	.
Template Sequence		E	K	S	R	M	L	F	E	R	T	K	E	L	F	P	G	G	V	N	S	P	V	R	A	A	.	.	.	V	K	P	Y	P	F	Y	V	K	R	G	E	G	A	Y	L	Y	T	V	D	G	A	R	I	V	D	L	V	L	A	Y	G	P	L	I	L	G	H	K	H	P	R	V	L	E	A	V	E	E	A	L	A
Template Known Secondary structure												T	T	T	S	G	G	G	S	S	S	G	G	G	G	G	.	.	.		S	S	S									B	T					T	T							S	S	G	G	G	T	T		T	T		B	S													T
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.																				.	.	.
Query SS confidence																															.																				.	.	.
Query Sequence		S	P	V	T	L	E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	.	G	A	E	D	A	C	I	V	N	N	N	A	A	A	V	L	L	M	L	.	.	.	A	A	T	A	S	G	K	E	V	V	V	S	R	G	E	L	V	E	I	G	G	A	F	R	I	P	D	V
Query Conservation																															.																				.	.	.
Alig confidence							.	.	.	.	.	.																			.																				.	.	.																				.	.	.	.	.
Template Conservation							.	.	.	.	.	.																																																													.	.	.	.	.
Template Sequence		R	G	W	L	Y	.	.	.	.	.	.	G	A	P	G	E	A	E	V	L	L	A	E	K	I	L	G	Y	V	K	R	G	G	M	I	R	F	V	N	S	G	T	E	A	T	M	T	A	I	R	L	A	R	G	Y	T	G	R	D	L	I	L	K	F	D	G	C	Y	H	G	S	.	.	.	.	.	H	D	A	V
Template Known Secondary structure		T		S			.	.	.	.	.	.	S	S			S															T	T							S	S																										T					S	.	.	.	.	.	S	G	G	G
Template Predicted Secondary structure							.	.	.	.	.	.																																																													.	.	.	.	.
Template SS confidence
		87	.	.	90	.							.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.						.	.	.	.
		190	.	.	.	.	.	.														.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	Q	A	G	C	T	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	E	V	G	T	T	N	R	T	H	A	N	D	Y	R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L	G	K	E	L	D	V	P	V	V
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	A	A	G	G	V	P	T	S	A	G	V	P	E	A	V	A	R	L	T	L	V	T	P	Y	N	D	V	E	A	L	E	R	V	F	A	E	Y	G	D	R	I	A	G	V	I	V	E	P	V	I	A	N	A	G	V	I	P	P	R	R	E	F	L	A	A	L	Q	R	L	S	R	E	S	G	A	L	L	I
Template Known Secondary structure		S								S	S	T	T							T	T						T	T													G	G	G								S	S	B		S	S	S		B																		T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.				.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	G	G	P	Q	A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	.	.	.	P	L	K	R	A	L	R	A	D	K	M	T	L	A	A
Query Conservation																																																																.	.	.
Alig confidence																.	.	.	.	.	.	.																						.																				.	.	.
Template Conservation																.	.	.	.	.	.	.																						.
Template Sequence		L	D	E	V	V	T	G	F	R	L	G	L	E	G	.	.	.	.	.	.	.	A	Q	G	Y	F	N	I	E	G	D	I	I	V	L	G	K	I	I	G	G	G	.	F	P	V	G	A	V	A	G	S	R	E	V	M	S	L	L	T	P	Q	G	K	V	F	N	A	G	T	F	N	A	H	P	I	T	M	A	A
Template Known Secondary structure					T	T	T	T	T	T	S	S	T	T		.	.	.	.	.	.	.						T				S						G	G	G	G	T	T	.	S	S												T	T	B	T	T	T	S	S	B					T	T	T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.																						.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.								.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	A	T	L	K	A	L	E	E	E	P	V	Y	S	V	S	R	E	A	A	K	A	L	E	E	A	A	S	E	V	L
Template Known Secondary structure												S
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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