Job Description P0A821 Confidence 99.95% Date Thu Jan 5 11:06:39 GMT 2012 Rank 38 Aligned Residues 370 % Identity 15% Template c2w8wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine palmitoyltransferase; PDBTitle: n100y spt with plp-ser Resolution 2.14 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																																								.	.	.
Query SS confidence																																																								.	.	.
Query Sequence		E	L	L	R	Q	M	L	D	E	A	R	E	V	I	R	G	S	Q	T	L	P	A	W	C	E	N	W	A	Q	E	V	D	A	R	L	T	K	E	A	Q	S	A	L	R	P	V	I	N	L	T	G	T	V	L	.	.	.	H	T	N	L	G	R	A	L	Q	A	E	A	A	V	E	A	V	A	Q	A	M	R	S
Query Conservation																																																								.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.																								.	.	.									.
Template Conservation																							.	.	.	.	.	.	.	.	.	.																																			.
Template Sequence		S	K	F	D	G	L	I	A	E	R	Q	K	L	L	D	S	G	V	T	D	P	.	.	.	.	.	.	.	.	.	.	F	A	I	V	M	E	Q	V	K	S	P	T	E	A	V	I	R	G	K	D	T	I	L	L	G	T	Y	N	Y	M	G	M	T	F	.	D	P	D	V	I	A	A	G	K	E	A	L	E	K
Template Known Secondary structure		G	G	G													T	T				G	.	.	.	.	.	.	.	.	.	.	G	G				S				S	S	S					T	T							S				T	T		G	G	G	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.																																			.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.											.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.
		115		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		P	.	V	T	L	E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	A	E	D	A	C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	A	T	A	S	G	K	E	V	V	V	S	R	G	E	L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A
Query Conservation			.
Alig confidence			.																																																																		.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.
Template Sequence		F	G	S	G	T	Y	G	S	R	M	L	N	G	T	F	H	D	H	M	E	V	E	Q	A	L	R	D	F	Y	G	T	T	G	A	I	V	F	S	T	G	Y	M	A	N	L	G	I	I	S	T	L	A	G	K	G	E	Y	V	I	L	D	A	D	S	H	A	S	.	.	.	.	.	I	Y	D	G	C	Q	Q	G
Template Known Secondary structure				S				S	B	T	T	T	T	T																	T		S						S														S		T	T							T	T					.	.	.	.	.								S
Template Predicted Secondary structure																																																																					.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.						.	.	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		G	C	T	L	H	E	V	G	T	T	N	R	T	H	A	N	D	Y	.	R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L	G	K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L
Query Conservation																				.
Alig confidence																				.																							.	.	.	.																																		.	.
Template Conservation																																											.	.	.	.																																		.	.
Template Sequence		N	A	E	I	V	R	F	R	H	N	S	V	E	D	L	D	K	R	L	G	R	L	P	K	E	P	A	K	L	V	V	L	E	G	V	Y	S	M	L	G	D	.	.	.	.	I	A	P	L	K	E	M	V	A	V	A	K	K	H	G	A	M	V	L	V	D	E	A	H	S	M	G	F	F	G	P	N	G	.	.
Template Known Secondary structure			S							T	T												S		S	S	S								S			T	T	T	T		.	.	.	.														T	T								T	T	T	T	T	T	S	S	T	T	S	.	.
Template Predicted Secondary structure																																											.	.	.	.																																		.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210					.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	G	G	P	Q	A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	P	L	K	R	A	L	R	A	D	K	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P
Query Conservation
Alig confidence		.																												.																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																												.																																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	R	G	V	Y	E	A	Q	G	L	E	G	Q	I	D	F	V	V	G	T	F	S	K	S	V	G	T	V	.	G	G	F	V	V	S	N	H	P	K	F	E	A	V	R	L	A	C	R	P	Y	I	F	T	A	S	L	P	P	S	V	V	A	T	A	T	.	.	.	.	.	.	.	.	.	.	.	T	S	I	R
Template Known Secondary structure		.							T	T		T	T	T		S						S	T	T	T	T		S	S	.									T	T	G	G	G										T	S	B												.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.																												.																																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.												.	.	.	310
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q	R	L	Q	A	P	L	A	A	H	Y	G	A	E	F	A	V	Q	V	M	P	C	L	S	Q	I	G	S	G	S	L	P	V	D	R	L	P	S	A	A	L	T	F	T	P	H	D	G	R	G	S	H	L	E	S	L	A	A	R	W	R	E	L	P
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Sequence		K	L	M	T	A	H	E	K	R	E	R	L	W	S	N	A	R	A	L	H	G	G	L	K	A	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	R	L	G	T	E	T	C	D	S	A	I	V	A	V	M	L	.	.	E	D	Q	E	Q	A	A	M	M	W	Q	A	L	L	D	G	G
Template Known Secondary structure				T	T																						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T				S		S	S			S	S							.	.	S	S														T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.																		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		433	.	.	.	.	.	.	440							.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure										.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.
Query Sequence		V	P	V	I	G	R	I	Y	.	.	.	.	.	.	D	G	R	L	W	L	D	L	R	C	L	E	D	E	Q	R	F	L	E	M	L
Query Conservation										.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.
Template Conservation
Template Sequence		L	Y	V	N	M	A	R	P	P	A	T	P	A	G	T	F	L	L	R	C	S	I	C	A	E	H	T	P	A	Q	I	Q	T	V	L
Template Known Secondary structure									T	T	T	S		T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.