Job Description P0A821 Confidence 99.92% Date Thu Jan 5 11:06:39 GMT 2012 Rank 69 Aligned Residues 337 % Identity 12% Template c2ordA_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase (ec 2.6.1.11)2 (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution Resolution 1.40 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.							.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.
Query Sequence		E	A	Q	S	A	L	R	P	V	I	N	L	T	G	T	V	L	H	.	.	.	.	.	.	T	N	L	G	R	A	L	Q	A	E	A	A	V	E	A	V	A	Q	A	M	R	S	P	V	T	L	E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	A	E	D	A	C
Query Conservation																				.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.								.	.																		.	.	.	.
Template Conservation																																	.	.																		.	.	.	.
Template Sequence		Y	G	K	G	S	W	I	Y	D	E	K	G	N	A	Y	L	D	F	T	S	G	I	A	V	N	V	L	G	H	S	H	.	.	P	R	L	V	E	A	I	K	D	Q	A	E	K	L	I	H	C	.	.	.	.	S	N	L	F	W	N	R	P	Q	X	E	L	A	E	L	L	S	K	N	T	F	G	G	K	V	F
Template Known Secondary structure					B	T					T	T							S	S					T		T	T		B	T		.	.															S			.	.	.	.		T	T	S															T	T	T	S
Template Predicted Secondary structure																																	.	.																		.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.									.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.										.	.	.	210	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.
Query Sequence		I	V	N	N	N	A	A	A	V	L	L	M	L	A	A	T	A	S	.	.	.	.	.	.	.	.	G	K	E	V	V	V	S	R	G	E	L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	R	T	.	.	.	.	.	.	.	.	.	H	A	N	D	Y
Query Conservation																				.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.															.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.
Template Sequence		F	A	N	T	G	T	E	A	N	E	A	A	I	K	I	A	R	K	Y	G	K	K	K	S	E	K	K	Y	R	I	L	S	A	H	N	S	F	H	G	R	.	.	.	.	.	T	L	G	S	L	T	A	T	G	Q	P	K	Y	Q	K	P	F	E	P	L	V	P	G	F	E	Y	F	E	F	N	N	V	E	D	L
Template Known Secondary structure				S	S																					T	T								B	T					S	.	.	.	.	.	S							S	B						G	G	G		S			T	T						T	T
Template Predicted Secondary structure																																										.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.						130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L	G	K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F
Query Conservation
Alig confidence																																																													.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.
Template Sequence		R	R	K	X	S	E	D	V	C	A	V	F	L	E	P	I	Q	G	E	S	G	I	V	P	A	T	K	E	F	L	E	E	A	R	K	L	C	D	E	Y	D	A	L	L	V	F	D	E	V	Q	C	G	X	G	R	T	G	K	L	.	.	.	.	.	.	F	A	Y	Q	K	Y	G	V	V	P	D	V	L	T	T
Template Known Secondary structure							T	T								S				T	T	T																				T								T	T	T	T	T	T	T	T	S	S	S	.	.	.	.	.	.	S						T				S
Template Predicted Secondary structure																																																													.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.							.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	D	K	L	L	G	G	P	Q	A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	P	L	K	R	A	L	R	A	D	K	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q	R	L
Query Conservation
Alig confidence																				.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	G	L	G	G	G	V	P	I	G	A	V	I	V	N	E	R	.	.	A	N	V	L	E	P	G	D	H	G	T	T	F	G	G	N	P	L	A	C	R	A	G	V	T	V	I	K	E	L	T	K	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	L	E	E	V	E	E	K	G	N	Y	L
Template Known Secondary structure			G	G	G	G	T	T	S									S	T	.	.	T					T	T	S	S			S	S	T	T																T	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290															.	.	.	.	.	.	.	.	.	300	.	.
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	P	L	A	A	H	Y	G	A	E	F	A	V	Q	V	M	P	C	L	S	Q	I	G	S	G	S	L	P	V	D	R	L	P	S	A	A	L	T	F	T	P	H	D	G	R	G	S	H	L	E	S	L	A	A	R	W	R	E	L	P	V	P	V	I	G	R	I	Y	D	G	R	L	W	L	D	L	R	C	L
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Sequence		X	K	K	L	Q	E	X	K	E	E	Y	D	V	V	A	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	X	G	L	X	I	G	I	Q	F	R	E	E	V	S	N	R	E	V	A	T	K	C	F	E	N	K	L	.	L	V	V	P	A	G	N	N	T	I	R	F	L	P	P	L	T
Template Known Secondary structure													T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T								T	T	S												T	T		.						T	T	T								T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.																	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		452	.	.	.	.	.	.	.	460	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	E	Q	R	F	L	E	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	Y	G	E	I	D	L	A	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		366	.	.	.	370	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions