Job Description P0A821 Confidence 99.95% Date Thu Jan 5 11:06:39 GMT 2012 Rank 35 Aligned Residues 334 % Identity 16% Template c2ogeC_ PDB info PDB header:transferase Chain: C: PDB Molecule:transaminase; PDBTitle: x-ray structure of s. venezuelae desv in its internal2 aldimine form Resolution 2.05 Å

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		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		L	Q	A	E	A	A	V	E	A	V	A	Q	A	M	R	S	P	V	T	L	E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	A	E	D	A	C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	A	T	.	.	A	S	G	K	E	V	V	V	S	R	G	E
Query Conservation																																																																				.	.
Alig confidence																							.	.	.	.	.	.	.	.																																						.	.
Template Conservation																							.	.	.	.	.	.	.	.
Template Sequence		E	L	R	A	E	T	D	A	A	I	A	R	V	L	D	S	G	R	Y	L	L	.	.	.	.	.	.	.	.	G	P	E	L	E	G	F	E	A	E	F	A	A	Y	C	E	T	D	H	A	V	G	V	N	S	G	M	D	A	L	Q	L	A	L	R	G	L	G	I	G	P	G	D	E	V	I	V	P	S	H	T
Template Known Secondary structure			T															T			S	S	.	.	.	.	.	.	.	.	S														T	T	S	S						S													T	T			T	T							S	S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.									.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	R	T	H	A	N	D	Y	R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L	G	K	E	L	D	V	P	V	V
Query Conservation
Alig confidence						.	.	.	.	.	.																																																.	.	.	.
Template Conservation						.	.	.	.	.	.																																																.	.	.	.
Template Sequence		Y	I	A	S	.	.	.	.	.	.	W	L	A	V	S	A	T	G	A	T	P	V	P	V	E	P	H	E	D	H	P	T	L	D	P	L	L	V	E	K	A	I	T	P	R	T	R	A	L	L	P	V	H	L	Y	G	H	.	.	.	.	P	A	D	M	D	A	L	R	E	L	A	D	R	H	G	L	H	I	V
Template Known Secondary structure						.	.	.	.	.	.						T	T	T								B		S	S	S	S	S	B						G	G	G			S	S							B		G	G	G		.	.	.	.														T	T
Template Predicted Secondary structure						.	.	.	.	.	.																																																.	.	.	.
Template SS confidence
		93	.	.	.							.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.					.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	G	G	P	Q	A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	P	L	K	R	A	L	R	A	D	K	M	T	L	A	A	L	E	A
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.																																																.	.	.
Template Conservation																							.	.	.	.	.	.	.	.																																																.	.	.
Template Sequence		E	D	A	A	Q	A	H	G	A	R	Y	R	G	R	R	I	G	A	G	S	S	.	.	.	.	.	.	.	.	V	A	A	F	S	F	Y	P	G	N	L	G	C	F	G	D	G	G	A	V	V	T	G	D	P	E	L	A	E	R	L	R	M	L	R	N	Y	G	S	R	Q	K	Y	S	H	E	T	.	.	.	K
Template Known Secondary structure					T	T		T	T				T	T			T	T		T	T		.	.	.	.	.	.	.	.														S	S								S												T	B	T	T		S	B	T	T	B		S	S	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.																																																.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.									.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230				.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.								.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.
Query Sequence		T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q	R	L	Q	A	P	L	A	A	H	Y	G	A	E	F	A	V	Q	V	M	P	C	L	S	Q	I	G	S	G	S	L	P	V	D	R	.	.	.	.	.	.	.	L	P	S	A	A	L
Query Conservation																																																																					.	.	.	.	.	.	.
Alig confidence																																																																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	T	N	S	R	L	D	E	M	Q	A	A	V	L	R	I	R	L	A	H	L	D	S	W	N	G	R	R	S	A	L	A	A	E	Y	L	S	G	L	A	G	L	P	G	I	G	L	P	V	T	A	P	D	T	D	P	V	W	H	L	F	T	V	R	T	E	R	R	D	E	L	R	S	H	L	D	A	R	G	I
Template Known Secondary structure				B																	T																			T	T	T		T	T	S	B						T	T						S							T	T											T	T	B
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.			.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		T	F	T	P	H	D	G	R	G	S	H	L	E	S	L	A	A	R	W	.	.	R	E	L	P	V	P	V	I	G	R	I	Y	D	G	R	L	W	L	D	L	R	C	L	E	D	E	Q	R	F	L	E	M	L
Query Conservation																					.	.
Alig confidence																					.	.
Template Conservation
Template Sequence		D	T	L	T	H	Y	P	V	P	V	H	L	S	P	A	Y	A	G	E	A	P	P	E	G	S	L	P	R	A	E	S	F	A	R	Q	V	L	S	L	P	I	G	P	H	L	E	R	P	Q	A	L	R	V	I
Template Known Secondary structure				B		S		S	S		G	G	G	S	G	G	G	T	T	T	S			T	T	S																	S	T	T
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions