Job Description P0A821 Confidence 99.91% Date Thu Jan 5 11:06:39 GMT 2012 Rank 73 Aligned Residues 329 % Identity 11% Template c2eh6A_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase from aquifex2 aeolicus vf5 Resolution 1.90 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.							.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.
Predicted Secondary structure																				.	.	.	.	.	.																																																							.
Query SS confidence																				.	.	.	.	.	.																																																							.
Query Sequence		E	A	Q	S	A	L	R	P	V	I	N	L	T	G	T	V	L	H	.	.	.	.	.	.	T	N	L	G	R	A	L	Q	A	E	A	A	V	E	A	V	A	Q	A	M	R	S	P	V	T	L	E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	A	E	D	.	A
Query Conservation																				.	.	.	.	.	.																																																							.
Alig confidence																				.	.	.	.	.	.							.	.																			.	.	.	.																									.
Template Conservation																																.	.																			.	.	.	.
Template Sequence		R	G	K	G	V	Y	L	Y	D	E	E	G	K	E	Y	L	D	F	V	S	G	I	G	V	N	S	L	G	H	A	.	.	Y	P	K	L	T	E	A	L	K	E	Q	V	E	K	L	L	H	V	.	.	.	.	S	N	L	Y	E	N	P	W	Q	E	E	L	A	H	K	L	V	K	H	F	W	T	E	G	K	V
Template Known Secondary structure					B	T					T	T							S	S					T		T	T		B	S	.	.																S			.	.	.	.		T	T	S															T	S	S	S
Template Predicted Secondary structure																																.	.																			.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.									.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.										.	.	.	210
Predicted Secondary structure																			.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.
Query Sequence		C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	A	T	.	.	.	.	.	.	.	.	A	S	G	K	E	V	V	V	S	R	G	E	L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	R	T	.	.	.	.	.	.	.	.	.	H	A	N	D
Query Conservation																			.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.																	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.
Template Sequence		F	F	A	N	S	G	T	E	S	V	E	A	A	I	K	L	A	R	K	Y	W	R	D	K	G	K	N	K	W	K	F	I	S	F	E	N	S	F	H	G	R	.	.	.	.	.	T	Y	G	S	L	S	A	T	G	Q	P	K	F	H	K	G	F	E	P	L	V	P	G	F	S	Y	A	K	L	N	D	I	D	S
Template Known Secondary structure					S	S																			T	T										B	T					S	.	.	.	.	.	S								B		G	G	G	T	T	T	T		S			S	S						T	T
Template Predicted Secondary structure																																											.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130						.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L	G	K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S
Query Conservation
Alig confidence																																																														.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.
Template Sequence		V	Y	K	L	L	D	E	E	T	A	G	I	I	I	E	V	I	Q	G	E	G	G	V	N	E	A	S	E	D	F	L	S	K	L	Q	E	I	C	K	E	K	D	V	L	L	I	I	D	E	V	Q	T	G	I	G	R	T	G	E	F	.	.	.	.	.	.	Y	A	Y	Q	H	F	N	L	K	P	D	V	I	A
Template Known Secondary structure				T	T			T	T								S			T	T	T	T	S																			T								T	T	T	T	T	T	T	T	S	S	S	.	.	.	.	.	.	S	G	G	G	G	G	T				S
Template Predicted Secondary structure																																																														.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.							.	.	.	.	.	230	.	.	.	.	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	G	D	K	L	L	G	G	P	Q	A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	P	L	K	R	A	L	R	A	D	K	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q	R
Query Conservation
Alig confidence								.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	K	G	L	G	.	G	G	V	P	I	G	A	I	L	A	R	E	E	V	A	Q	S	F	T	P	G	S	H	G	S	T	F	G	G	N	P	L	A	C	R	A	G	T	V	V	V	D	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	L	L	P	H	V	R	E	V	G	N	Y
Template Known Secondary structure				G	G	G	G	.	T	T	S													T	T			T	T	S				S	S	T	T																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.																	.	290	.	.	.	.	.	.	.	.	.	300	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	A	P	L	A	A	H	Y	G	A	E	F	A	V	Q	V	M	P	C	L	S	Q	I	G	S	G	S	L	P	V	D	R	L	P	S	A	A	L	T	F	T	P	H	D	G	R	G	S	H	L	E	S	L	A	A	R	W	R	E	L	P	V	P	V	I	G	R	I	Y	D	G	R	L	W	L	D	L	R	C
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation										.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		F	K	E	K	L	K	E	L	.	.	.	.	.	.	.	.	.	.	G	K	G	K	V	K	G	R	G	L	M	L	G	L	E	L	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	E	C	K	D	Y	V	L	K	A	L	E	K	G	L	.	L	I	N	C	T	A	G	K	V	L	R	F	L	P	P	L
Template Known Secondary structure									T	.	.	.	.	.	.	.	.	.	.	T	S	S						T	T							S	S	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T		.						T	T	T								T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
		302	.	.	.	.	.	.	.											310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.														.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		451	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	D	E	Q	R	F	L	E	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	Q	K	E	H	I	D	R	A	I
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions