Job Description P0A821 Confidence 99.84% Date Thu Jan 5 11:06:39 GMT 2012 Rank 165 Aligned Residues 223 % Identity 19% Template c2a7vA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine hydroxymethyltransferase; PDBTitle: human mitochondrial serine hydroxymethyltransferase 2 Resolution 2.04 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.					.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																														.			.	.	.	.
Query SS confidence																																														.			.	.	.	.
Query Sequence		E	A	V	A	Q	A	M	R	S	P	V	T	L	E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T	G	A	E	D	A	C	I	.	V	N	.	.	.	.	N	N	A	A	A	V	L	L	M	L	A	A	T	A	S	G	K	E	V	V	V	S	R	G	E	L	V	E	I
Query Conservation																																														.			.	.	.	.
Alig confidence																				.	.	.																								.			.	.	.	.																							.	.	.	.	.	.	.
Template Conservation																				.	.	.																																																					.	.	.	.	.	.	.
Template Sequence		R	A	A	L	E	A	L	G	S	C	L	N	N	K	Y	S	E	G	.	.	.	V	D	E	I	E	L	L	C	Q	R	R	A	L	E	A	F	D	L	D	P	A	Q	W	G	V	N	V	Q	P	Y	S	G	S	P	A	N	L	A	V	Y	T	A	L	L	Q	P	H	D	R	I	M	G	.	.	.	.	.	.	.
Template Known Secondary structure									T	S	G	G	G	T						.	.	.		T														T	T			T	T	T								S	S															S							.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.																																																					.	.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	R	T	H	A	N	D	Y	R	Q	A	V	N	E	N	T	A	L	L	M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	E	A	E	L	V	A	L	G	K	E	L	D	V	P	V	V	T	D	L	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	K	L	N	P	K	T	G	L	I	D	Y	N	Q	L	A	L	T	A	R	L	F	R	P	R	L	I	I	A	G	T	S	A	Y	A	R	L	I	.	.	.	.	.	D	Y	A	R	M	R	E	V	C	D	E	V	K	A	H	L	L	A	D	M	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B		T	T	T		S	B															S							S	S			S			.	.	.	.	.												T	T								G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.
Template SS confidence
																		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.						.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.																310	.	.	.	.	.	.	.	.		.	320	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	G	G	P	Q	A	G	I	I	V	G	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	M	I	A	R	L	Q	S	H	.	P	L	K	R	A	L
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence												.	.	.	.	.	.	.							.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation												.	.	.	.	.	.	.							.
Template Sequence		H	I	S	G	L	V	A	A	K	V	.	.	.	.	.	.	.	I	P	S	P	F	K	.	H	A	D	I	V	T	T	T	T	H	K	T	L	R	G	A	R	S	G	L	I	F	Y	R	K	G	V	K	A	V	D	P	K	T	G	R	E	I	P	Y	T	F	E	D	R	I	N	F	A	V	F	P	S	L	Q	G
Template Known Secondary structure		G	G						T	T	S	.	.	.	.	.	.	.	S			G	G	G	.	T		S						S	S	G	G	G		S		S									S						T	T	T																	T	T	T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.							.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.								.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	D	K	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q	R	L	Q	A	P	L	A	A	H
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	P	H	N	H	A	I	A	A	V	A	V	A	L	K	Q	A	C	T	P	M	F	.	.	.	.	.	.	.	.	.	.	.	R	E	Y	S	L	Q	V	L	K	N	A	R	A	M	A	D	A	L	L	E	R
Template Known Secondary structure		S																		S				.	.	.	.	.	.	.	.	.	.	.																					T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.												.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions