Job Description P0A821 Confidence 99.91% Date Thu Jan 5 11:06:39 GMT 2012 Rank 75 Aligned Residues 336 % Identity 11% Template c1z7dE_ PDB info PDB header:transferase Chain: E: PDB Molecule:ornithine aminotransferase; PDBTitle: ornithine aminotransferase py00104 from plasmodium yoelii Resolution 2.10 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.							.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																									.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.
Query Sequence		D	A	R	L	T	K	E	A	Q	S	A	L	R	P	V	I	N	L	T	G	T	V	L	.	.	.	.	.	.	H	T	N	L	G	R	A	L	Q	A	E	A	A	V	E	A	V	A	Q	A	M	R	S	P	V	T	L	E	Y	D	L	D	D	A	G	R	G	H	R	D	R	A	L	A	Q	L	L	C	R	I	T
Query Conservation																									.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.									.	.																	.	.	.	.
Template Conservation																																							.	.																	.	.	.	.
Template Sequence		I	P	V	V	L	K	R	A	K	G	V	F	V	Y	D	V	N	D	K	R	Y	Y	D	F	L	S	A	Y	S	S	V	N	Q	G	H	C	H	.	.	P	N	I	L	N	A	M	I	N	Q	A	K	N	L	T	I	.	.	.	.	C	S	R	A	F	F	S	V	P	L	G	I	C	E	R	Y	L	T	N	L	L
Template Known Secondary structure			S								B	T					T	T							S	S					T	T	T	T		B	T		.	.												T	T		S		.	.	.	.			T	T	S
Template Predicted Secondary structure																																							.	.																	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	E	D	A	C	I	V	N	N	N	A	A	A	V	L	L	M	L	A	A	T	A	S	G	K	E	V	V	V	S	R	G	E	L	V	E	I	G	G	A	F	R	I	P	D	V	M	R	Q	A	G	C	T	L	H	E	V	G	T	T	N	R	T	H	A	N	D	Y	R	Q	A	V	N	E	N	T	A	L	L
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Sequence		G	Y	D	K	V	L	M	M	N	T	G	A	E	A	N	E	T	A	Y	K	L	C	R	K	W	G	Y	E	V	K	K	I	P	E	N	M	A	K	I	.	.	.	.	.	.	.	.	.	.	.	.	V	V	C	F	S	K	V	P	Y	D	.	.	.	D	L	E	A	L	E	E	E	L	K	D	P	N	V	C	A
Template Known Secondary structure		T		S						S	S																			T	S				T	T					.	.	.	.	.	.	.	.	.	.	.	.									T	T	.	.	.										T	S	T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.													140	.	.	.	.	.	.	.	.	.				150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		M	K	V	H	T	S	N	Y	S	I	Q	G	F	T	K	A	I	D	.	E	A	E	L	V	A	L	G	K	E	L	D	V	P	V	V	T	D	L	G	S	G	S	L	V	D	L	S	Q	Y	G	L	P	K	E	P	M	P	Q	E	L	I	A	A	G	V	S	L	V	S	F	S	G	D	K	L	L	G	G	P	Q
Query Conservation																				.
Alig confidence																				.																															.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.
Template Sequence		F	I	V	E	P	I	Q	G	E	A	G	V	I	V	P	S	D	N	Y	L	Q	G	V	Y	D	I	C	K	K	Y	N	V	L	F	V	A	D	E	V	Q	T	G	L	G	R	T	G	K	L	.	.	.	.	.	.	L	C	V	H	H	Y	N	V	K	P	D	V	I	L	L	G	K	A	L	S	G	G	H	Y	P
Template Known Secondary structure						S	S	B	S	T	T	T		B				T	T												T	T								T	T	T	T	T	T	T	T	S	S	S	.	.	.	.	.	.	S	G	G	G	G	G	T				S						G	G	G	G	T	T	S	S
Template Predicted Secondary structure																																																			.	.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.							.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	I	I	V	G	K	K	E	M	I	A	R	L	Q	S	H	P	L	K	R	A	L	R	A	D	K	M	T	L	A	A	L	E	A	T	L	R	L	Y	L	H	P	E	A	L	S	E	K	L	P	T	L	R	L	L	T	R	S	A	E	V	I	Q	I	Q	A	Q	R	L	Q	A	P	L	A	A	H	Y	G	A
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	A	V	L	A	N	D	D	I	M	L	V	I	K	P	G	E	H	G	S	T	Y	G	G	N	P	L	A	A	S	I	C	V	E	A	L	N	V	L	I	N	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	C	E	N	A	E	K	L	G	G	P	F	L	E	N	L	K	R	E	L	K	D
Template Known Secondary structure													T	T											T	T																		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				T	T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.															.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	A	V	Q	V	M	P	C	L	S	Q	I	G	S	G	S	L	P	V	D	R	L	P	S	A	A	L	T	F	T	P	H	D	G	R	G	S	H	L	E	S	L	A	A	R	W	R	E	L	P	V	P	V	I	G	R	I	Y	D	G	R	L	W	L	D	L	R	C	L	E	D	E	Q	R	F	L	E	M	L
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Sequence		S	K	I	V	R	D	V	R	G	K	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	C	A	I	E	F	K	N	E	L	V	N	V	L	D	I	C	L	K	L	K	E	N	G	L	.	I	T	R	D	V	H	D	K	T	I	R	L	T	P	P	L	C	I	T	K	E	Q	L	D	E	C	T
Template Known Secondary structure			T	T								T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T													T	T		.						T	T	T								T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.																.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions