 |
Job Description | P0A821 | Confidence | 65.72% | Date | Thu Jan 5 11:06:39 GMT 2012 |
Rank | 273 | Aligned Residues | 97 |
% Identity | 18% | Template | c1x1qA_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:tryptophan synthase beta chain; |
PDBTitle: crystal structure of tryptophan synthase beta chain from thermus2 thermophilus hb8
|
Resolution | 2.50 Å |
|
 |
  |   |
115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | |
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | |
|
|
. | . | 180 | . | . | . | . | . | . | . | . | . | 190 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
| . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | V | T | L | E | Y | D | L | D | D | A | G | R | G | H | R | D | R | A | L | A | Q | L | L | C | R | I | T | G | A | E | D | A | C | I | . |
V | N | N | N | A | A | A | V | L | L | M | L | A | A | T | A | S | G | K | E | V | V | V | S | R | G | E | L | . |
. |
. |
V | E | I | G | G | A | F | R | I | P | D | V | M |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |
|   |
|   |
| . |   |   |
|
|   |   |
|   |   |
|
|
|   |
|
|   |   |   |   |
|
|
|
|   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |
|
|
|
|
|
|   |
|   |
|   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |
|
|
|
|
|
|   |
|
|
|   |   |
|
|   |   |
|
|   |   |   |
| . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
F | L | K | R | E | D | L | L | H | T | G | A | H | K | I | N | N | T | L | G | Q | A | L | L | A | R | R | X | G | K | R | R | V | I | A | E | T | G | A | G | Q | H | G | V | S | V | A | T | V | A | A | L | F | G | L | E | C | V | V | . |
. |
. |
. |
Y | X | G | E | E | D | V | R | R | Q | A | L | N | V | F | R | X |
Template Known Secondary structure |   |
 |  |  |  | G | G | G | S | G | G | G | B | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . | . |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | |
|
|
|
. | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
  |
  |   |
191 | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | Q | A | G | C | T | L | H | E | V | G | T | T | N | R | T | H | A | N | D | Y | R | Q | A | V |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
Template Sequence |   |
K | L | L | G | A | E | V | R | P | V | A | A | G | S | R | T | L | K | D | A | T | N | E | A | I |
Template Known Secondary structure |   |
 |  | T | T |
|  |  |  |  |  |
| S | T | T | S | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|