Return to main results Retrieve Phyre Job Id

Job DescriptionP76402
Confidence8.72%DateThu Jan 5 12:22:41 GMT 2012
Rank83Aligned Residues38
% Identity5%Templated1t6sa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain ScpB/YpuH-like
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40......... 50.........60.........70...
Predicted Secondary structure 
.









Query SS confidence 














.























Query Sequence  SKTSAEKGIASVRSN. SPQEERYEKKTASNGKFYFNLKAA
Query Conservation   
  
   
  

  .
     

      
   


   
Alig confidence 














.











.










Template Conservation      
   
  
   
    

 

   .  



 

 
Template Sequence  TPSELQEAVDELNRDYEATGRTFRIHAI. AGGYRFLTEPE
Template Known Secondary structure 
T
S.TT
GG
Template Predicted Secondary structure 





.


Template SS confidence 







































   37..40.........50.........60.... .....70.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions