Job Description P76402 Confidence 42.61% Date Thu Jan 5 12:22:41 GMT 2012 Rank 14 Aligned Residues 94 % Identity 9% Template c2l5oA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative thioredoxin; PDBTitle: solution structure of a putative thioredoxin from neisseria2 meningitidis Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.																													.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	K	S	S	D	N	Q	F	R	F	V	L	K	A	G	N	G	E	T	I	L	T	S	E	L	Y	T	S	K	T	S	A	E	K	G	I	A	S	V	R	S	N	S	P	Q	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	E	K	K
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		L	P	D	L	H	G	K	.	T	V	S	N	A	D	L	Q	G	K	V	T	L	I	N	F	W	F	P	S	C	P	G	C	V	S	E	M	P	K	I	I	K	T	A	N	D	Y	K	N	K	N	F	Q	V	L	A	V	A	Q	P	I	D	P	I	E	S	V	R	Q	Y	V	K	D	Y	G	L	P	F	T	V	M
Template Known Secondary structure					T	T	S		.								T	T										T	T		T	T															G	G	G	T	T									T	T	S												T	T			S
Template Predicted Secondary structure									.
Template SS confidence
		10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		60	.	.	.	.	.											.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	S	N	G	K	.	.	.	.	.	.	.	.	.	.	F	Y	F	N	L	K	A	A	N	H	Q	I	I	G	S	S	Q	M	Y	A	T	A	Q	S	R	E	T	G	I	A	S	V	K	A	N	G	T
Query Conservation								.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	D	A	D	K	A	V	G	Q	A	F	G	T	Q	V	Y	P	T	S	V	L	I	G	K	K	G	E	I	L	K	T	Y	V	G	E	P	D	F	G	K	L	Y	Q	E	I	D	T	A	W	R	N	S	D
Template Known Secondary structure				S	S								T			S	S	S							S	S	S								S	S																		S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions