Job Description P76402 Confidence 9.55% Date Thu Jan 5 12:22:41 GMT 2012 Rank 78 Aligned Residues 37 % Identity 14% Template c2aivA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:fragment of nucleoporin nup116/nsp116; PDBTitle: multiple conformations in the ligand-binding site of the2 yeast nuclear pore targeting domain of nup116p Resolution UNK

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	K	T	S	A	E	K	G	I	A	S	V	R	S	N	S	P	Q	E	E	R	Y	E	K	K	T	A	S	N	G	K	F	Y	F	N	L	K	A
Query Conservation
Alig confidence																	.	.
Template Conservation																	.	.
Template Sequence		P	N	H	Q	L	V	K	R	H	I	E	R	L	K	K	.	.	N	P	N	S	K	F	E	S	Y	D	A	D	S	G	T	Y	V	F	I	V	N	H
Template Known Secondary structure		T	T		S	S											.	.		T	T	S							T	T	T
Template Predicted Secondary structure																	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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