 |
Job Description | P76402 | Confidence | 14.19% | Date | Thu Jan 5 12:22:41 GMT 2012 |
Rank | 53 | Aligned Residues | 28 |
% Identity | 18% | Template | c1k82D_ |
PDB info |
PDB header:hydrolase/dna | Chain: D: PDB Molecule:formamidopyrimidine-dna glycosylase; |
PDBTitle: crystal structure of e.coli formamidopyrimidine-dna2 glycosylase (fpg) covalently trapped with dna
|
Resolution | 2.10 Å |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | |
|
|
. | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
| . | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | A | G | W | F | E | L | S | K | S | . |
. |
. |
S | D | N | Q | F | R | F | V | L | K | A | G | N | G | E | T | I | L |
Query Conservation |   |
|
|
|   |
|
|
|   |   |   | . | . | . |   |   |
|   |   |
|
|
|
|   |
|   |
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
Template Sequence |   |
M | S | G | S | L | R | I | L | P | E | E | L | P | P | E | K | H | D | H | V | D | L | V | M | S | N | G | K | V | L | R |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  | S | S |
|
|
|
|
| T | T |
|
|  |  |  |  |  | T | T | S |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|