Job Description P77690 Confidence 99.93% Date Thu Jan 5 12:31:41 GMT 2012 Rank 149 Aligned Residues 327 % Identity 11% Template d1w23a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.08

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.														.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.								.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.								.
Query Sequence		S	R	P	A	M	G	V	E	E	L	A	A	V	K	E	V	L	E	S	G	W	I	T	T	G	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Q	A	L	E	Q	A	F	C	Q	L	T	G	N	Q	.	.	.	H	A	I	A	V	S	S	.	A	T	A	G	M	H	I	T	L	M	A	L	K	I
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.								.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.								.													.
Template Conservation																																																																																.
Template Sequence		G	P	S	A	L	P	K	P	A	L	E	R	A	Q	K	E	L	L	N	F	N	D	T	Q	M	S	V	M	E	L	S	H	R	S	Q	S	Y	E	E	V	H	E	Q	A	Q	N	L	L	R	E	L	L	Q	I	P	N	D	Y	Q	I	L	F	L	Q	G	G	A	S	L	Q	F	T	M	L	P	M	N	L	.	L
Template Known Secondary structure		S	S														T	S	S	S	S	T	T	S	S	S		G	G	G	S		T	T	S																			T			T	T							S	S														.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.								.
Query SS confidence																																							.	.	.	.								.
Query Sequence		G	K	G	D	E	V	I	T	P	S	L	T	W	V	S	T	L	N	M	I	S	L	L	G	A	T	P	V	M	V	D	V	D	R	D	T	L	.	.	.	.	M	V	T	P	E	A	I	.	E	S	A	I	T	P	R	T	K	A	I	I	P	V	H	Y	A	G	A	P	A	D	I	D	A	I	R	A	I	G	E
Query Conservation																																							.	.	.	.								.
Alig confidence																																							.	.	.	.								.																							.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.
Template Sequence		T	K	G	T	I	G	N	Y	V	L	T	G	S	W	S	E	K	A	L	K	E	A	K	L	L	G	E	T	H	I	A	A	S	T	K	A	N	S	Y	Q	S	I	P	D	F	S	E	F	Q	L	N	E	N	D	A	Y	L	H	I	T	S	N	N	T	I	Y	G	T	Q	Y	Q	.	.	.	.	.	N	F	P	E
Template Known Secondary structure			T	T									S												T	T	S									G	G	G	T	S		S				G	G	G					T	T								S			T	T	T	T				S	.	.	.	.	.	S
Template Predicted Secondary structure																																																																									.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.						160	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	G	I	A	V	I	E	D	A	A	H	A	V	G	T	Y	Y	K	G	R	H	I	G	A	K	G	T	A	I	F	S	F	H	A	I	K	N	I	T	C	A	E	G	G	L	I	V	T	D	N	E	N	L	A	R	Q	L	R	M	L	K	F	H	G	L	G	V	D	A	Y	D	R	Q	T	W	G	R	A	P
Query Conservation
Alig confidence																								.	.	.	.																															.	.	.	.	.	.	.
Template Conservation																								.	.	.	.																															.	.	.	.	.	.	.
Template Sequence		I	N	H	A	P	L	I	A	D	M	S	S	D	I	L	S	R	P	L	K	V	N	.	.	.	.	Q	F	G	M	I	Y	A	G	A	Q	K	N	L	G	P	S	G	V	T	V	V	I	V	K	K	D	L	L	N	T	.	.	.	.	.	.	.	K	V	E	Q	V	P	T	M	L	Q	Y	A	T	H	I	K	S
Template Known Secondary structure				S	S							T	T	T	T	T	S	S				G	G	.	.	.	.	G		S						T	T	T	T	T	S		T	T													S	.	.	.	.	.	.	.			T	T			G	G	G								T
Template Predicted Secondary structure																								.	.	.	.																															.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.								.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	E	V	L	T	P	G	Y	K	Y	N	L	T	D	I	N	A	A	I	A	L	T	Q	L	V	K	L	E	H	L	N	T	R	R	R	E	I	A	Q	Q	Y	Q	Q	A	L	A	A	L	P	F	Q	P	L	S	L	P	A	W	P	H	V	H	A	W	H	L	F	I	I	R	V	D	E	Q	R	C	G	I	S
Query Conservation
Alig confidence																																																																														.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		D	S	L	Y	N	T	P	P	T	F	S	I	Y	M	L	R	N	V	L	D	W	I	K	D	L	G	G	A	E	A	I	A	K	Q	N	E	E	K	A	K	I	I	Y	D	T	I	D	E	S	N	G	F	Y	V	G	H	A	E	K	G	S	R	S	L	M	N	V	T	F	N	L	R	N	E	E	L	.	.	.	.
Template Known Secondary structure		T	T		S	S																				T	T																						T	T	T	T	S	S			S	S		G	G	G	B		S	S							S	S				.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	A	L	M	E	A	L	K	E	R	G	I	G	T	G	L	H	F	R	A	A	H	T	Q	K	Y	Y	R	E	R	F	P	T	L	S	L	P	N	T	E	W	N	S	E	R	I	C	S	L	P	L	F	P	D	M	T	T	A	D	A	D	H	V	I	T	A	L	Q	Q	L	A	G
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	Q	Q	F	L	A	K	A	K	E	Q	G	F	V	G	L	N	G	H	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	G	C	R	A	S	I	Y	N	A	V	P	I	D	A	C	I	A	L	R	E	L	M	I	Q	F	K	E
Template Known Secondary structure												T	T			S		B			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S							T	T	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.																								330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions