Job Description P77690 Confidence 99.95% Date Thu Jan 5 12:31:41 GMT 2012 Rank 86 Aligned Residues 330 % Identity 15% Template d1vp4a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.82

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		2	.	.	.	.	.			.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.						.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.										.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure								.	.							.	.	.	.															.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Query SS confidence								.	.							.	.	.	.															.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Query Sequence		S	E	F	L	P	F	.	.	S	R	P	A	M	G	.	.	.	.	V	E	E	L	A	A	V	K	E	V	L	E	S	G	.	.	.	.	.	W	I	T	T	G	P	K	N	Q	A	L	E	Q	A	F	C	Q	L	.	.	.	.	.	.	.	.	.	T	G	N	Q	H	A	I	A	V	S	S	A	T	A	G	M
Query Conservation								.	.							.	.	.	.															.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Alig confidence								.	.							.	.	.	.															.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	D	A	I	S	F	G	G	G	V	P	D	P	E	T	F	P	R	K	E	L	A	E	I	A	K	E	I	I	E	K	E	Y	H	Y	T	L	Q	Y	S	T	T	E	G	D	P	V	L	K	Q	Q	I	L	K	L	L	E	R	X	Y	G	I	T	G	L	D	E	D	N	L	I	F	T	V	G	S	Q	Q	A	L
Template Known Secondary structure		T	T								S			G	G	G	S																S					T	S				T	T																					S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.											.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		H	I	T	L	M	A	L	K	I	G	K	G	D	E	V	I	T	P	S	L	T	W	V	S	T	L	N	M	I	S	L	L	G	A	T	P	V	M	V	D	V	D	R	D	T	L	M	V	T	P	E	A	I	E	.	.	.	.	.	.	.	.	.	.	S	A	I	T	P	R	T	K	A	I	I	P	V	H	Y	A
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence									.																																															.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		D	L	I	G	K	L	F	.	L	D	D	E	S	Y	C	V	L	D	D	P	A	Y	L	G	A	I	N	A	F	R	Q	Y	L	A	N	F	V	V	V	P	L	E	D	D	G	X	D	L	N	V	L	E	R	K	L	S	E	F	D	K	N	G	K	I	K	Q	V	K	F	I	Y	V	V	S	N	F	H	N	P	A
Template Known Secondary structure									.			T	T								S											T	T	T										T	T																	T	T		G	G	G									S	S		T	T	T
Template Predicted Secondary structure									.
Template SS confidence
		111	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		132	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure							.	.	.																														.	.	.	.	.
Query SS confidence							.	.	.																														.	.	.	.	.
Query Sequence		G	A	P	A	D	.	.	.	I	D	A	I	R	A	I	G	E	R	Y	G	I	A	V	I	E	D	A	A	H	A	V	G	T	Y	Y	K	G	.	.	.	.	.	R	H	I	G	A	K	G	T	A	I	F	S	F	H	A	I	K	N	I	T	C	A	E	G	G	L	I	V	T	D	N	E	N	L	A	R	Q	L
Query Conservation							.	.	.																														.	.	.	.	.
Alig confidence							.	.	.																														.	.	.	.	.
Template Conservation
Template Sequence		G	V	T	T	S	L	E	K	R	K	A	L	V	E	I	A	E	K	Y	D	L	F	I	V	E	D	D	P	Y	G	A	L	R	Y	E	G	E	T	V	D	P	I	F	K	I	G	G	P	E	R	V	V	L	L	N	T	F	S	K	V	L	A	P	G	L	R	I	G	X	V	A	G	S	K	E	F	I	R	K	I
Template Known Secondary structure																				T	T								S	S	T	T		B		S	S												T	T	T							S	T	T	T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.								.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.
Query Sequence		R	M	L	K	F	H	G	L	G	V	D	A	Y	D	R	Q	T	W	G	R	A	P	Q	A	E	V	L	T	P	G	Y	K	Y	N	L	T	D	I	N	A	A	I	A	L	T	Q	L	V	.	.	.	.	.	.	.	K	L	E	H	L	N	T	R	R	R	E	I	A	Q	Q	Y	Q	Q	A	L	A	A	L	P	F
Query Conservation																																																		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	A	K	Q	S	A	D	L	C	S	P	A	I	T	H	R	L	A	A	R	Y	L	E	R	Y	D	L	L	E	Q	L	K	P	T	I	E	L	Y	R	R	K	R	T	V	X	L	N	A	L	E	E	Y	F	S	D	I	P	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	S																S						T																						S	T	T	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																							270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	L	S	L	P	A	W	P	H	V	H	A	W	H	L	F	I	I	R	V	D	E	Q	R	C	G	I	S	R	D	A	L	M	E	A	L	K	E	R	G	I	G	T	G	L	H	F	R	A	A	H	T	Q	K	Y	Y	R	E	R	F	P	T	L	S	L	P	N	T	E	W	N	S	E	R	I	C	S	L	P
Query Conservation
Alig confidence												.	.	.	.	.									.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.									.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	K	W	V	K	S	E	G	G	L	.	.	.	.	.	F	I	W	L	T	L	P	E	.	.	.	G	F	D	T	W	E	X	F	E	Y	A	K	R	K	K	V	F	Y	V	P	G	R	V	F	K	V	Y	D	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	S	X	R	L	S
Template Known Secondary structure								S	B	S	S	.	.	.	.	.								T	.	.	.	T			T	T	T	T								T						G	G	G	G		T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure												.	.	.	.	.									.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		329	330	.	.	.	.	.	.	.	.						.	340	.	.	.	.	.	.				.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.																		.	.	.	380	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	P	D	M	T	T	A	D	A	D	H	V	I	T	A	L	Q	Q	L	A	G	Q
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		F	C	L	.	P	P	D	E	K	I	V	E	G	I	K	R	L	R	E	V	V	L	E
Template Known Secondary structure			S	S	.	S
Template Predicted Secondary structure					.
Template SS confidence
		384	.	.		.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions