Phyre 2 alignment of P77690 with d1m32a

Job Description P77690
Confidence 99.95% Date Thu Jan 5 12:31:41 GMT 2012

Rank 83 Aligned Residues 345

% Identity 14% Template d1m32a_

SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like

Resolution 2.20

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.																								.	.	.	.
Query SS confidence																									.																								.	.	.	.
Query Sequence	F	L	P	F	S	R	P	A	M	G	V	E	E	L	A	A	V	K	E	V	L	E	S	G	.	W	I	T	T	G	P	K	N	Q	A	L	E	Q	A	F	C	Q	L	T	G	N	Q	H	.	.	.	.	A	I	A	V	S	S	A	T	A	G	M	H	I	T	L	M	A	L	K	I	G	K	G	D	E	V	I	T
Query Conservation																									.																								.	.	.	.
Alig confidence				.																					.																								.	.	.	.																			.
Template Conservation				.																																																																			.
Template Sequence	L	T	P	.	G	P	L	T	T	S	R	T	V	K	E	A	X	L	F	D	S	C	T	W	D	D	D	Y	N	I	G	V	V	E	Q	I	R	Q	Q	L	T	A	L	A	T	A	S	E	G	Y	T	S	V	L	L	Q	G	S	G	S	Y	A	V	E	A	V	L	G	S	A	.	L	G	P	Q	D	K	V	L	I
Template Known Secondary structure		S	S	.	S	S										T	T						T	T	S					T	T	T														S	S	S	S								S													S	.			T	T
Template Predicted Secondary structure				.																																																																			.
Template SS confidence
	8	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.

	79	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure										.	.																														.	.	.	.
Query SS confidence										.	.																														.	.	.	.
Query Sequence	P	S	L	T	W	V	S	T	L	.	.	N	M	I	S	L	L	G	A	T	P	V	M	V	D	V	D	R	D	T	L	M	V	T	P	E	A	I	E	S	.	.	.	.	A	I	T	P	R	T	K	A	I	I	P	V	H	Y	A	G	A	P	A	D	I	D	A	I	R	A	I	G	E	R	Y	G	I	A	V	I
Query Conservation										.	.																														.	.	.	.
Alig confidence										.	.																														.	.	.	.
Template Conservation
Template Sequence	V	S	N	G	A	Y	G	A	R	X	V	E	X	A	G	L	X	G	I	A	H	H	A	Y	D	C	G	E	V	A	R	P	D	V	Q	A	I	D	A	I	L	N	A	D	P	T	I	S	H	I	A	X	V	H	S	E	T	T	T	G	X	L	N	P	I	D	E	V	G	A	L	A	H	R	Y	G	K	T	Y	I
Template Known Secondary structure			S	S														T										T	T	S															T	T								S			T	T	T	T																T
Template Predicted Secondary structure
Template SS confidence
	86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.

	153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	D	A	A	H	A	V	G	T	Y	Y	K	G	R	H	I	G	A	K	G	T	A	I	F	S	F	H	A	I	K	N	I	T	C	A	E	G	G	L	I	V	T	D	N	E	N	L	A	R	Q	L	R	M	L	K	F	H	G	L	G	V	D	A	Y	D	R	Q	T	W	G	R	A	P	Q	A	E	V	L	T	P
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence	V	D	A	X	S	S	F	G	G	I	P	X	D	I	A	.	.	A	L	H	I	D	Y	L	I	S	S	A	N	K	C	I	Q	G	V	P	G	F	A	F	V	I	A	R	E	Q	K	L	A	A	C	K	G	H	S	R	S	L	S	L	D	L	Y	A	Q	W	R	C	X	E	D	N	H	G	K	W	R	F	T	S
Template Known Secondary structure				T	T	T	T	T	T	S				T	T	.	.	T	T	T		S						S	S	S	T	T				S	S												T	T		T	T			S		S	T	T												T	T	T			S	S
Template Predicted Secondary structure																.	.
Template SS confidence
	166	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

	233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	Y	K	Y	N	L	T	D	I	N	A	A	I	A	L	T	Q	L	V	K	L	E	H	L	N	T	R	R	R	E	I	A	Q	Q	Y	Q	Q	A	L	A	A	L	P	F	Q	P	L	S	L	P	A	W	P	H	V	H	A	W	H	L	F	I	I	R	V	D	E	Q	R	C	G	I	S	R	D	A	L	M	E	A
Query Conservation
Alig confidence																																												.	.	.	.
Template Conservation																																												.	.	.	.
Template Sequence	P	T	H	T	V	L	A	F	A	Q	A	L	K	E	L	A	K	E	G	G	V	A	A	R	H	Q	R	Y	Q	Q	N	Q	R	S	L	V	A	G	X	R	A	L	G	.	.	.	.	F	N	T	L	L	D	D	E	L	H	S	P	I	I	T	A	F	Y	S	P	E	D	P	Q	Y	R	F	S	E	F	Y	R	R
Template Known Secondary structure																			T																							T	T	.	.	.	.			B	S	S		G	G	G	B		S	S										T	T
Template Predicted Secondary structure																																												.	.	.	.
Template SS confidence
	244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.					.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

	313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	K	E	R	G	I	G	T	G	L	H	F	R	A	A	H	T	Q	K	Y	Y	R	E	R	F	P	T	L	S	L	P	N	T	E	W	N	S	E	R	I	C	S	L	P	L	F	P	D	M	T	T	A	D	A	D	H	V	I	T	A	L	Q	Q	L	A	G
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	L	K	E	Q	G	F	V	I	Y	P	G	K	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	S	D	C	F	R	I	G	N	I	G	E	V	Y	A	A	D	I	T	A	L	L	T	A	I	R	T	A	X	Y
Template Known Secondary structure				T	T									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S									S	S																		T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	320	.	.	.	.	.	.	.	.	.	330	.	.	.																							.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

Download:

Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions