|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | E | F | L | P | F | S | R | P | A | M | G | V | E | E | L | A | A | V | K | E | V | L | E | S | G | W | . |
. |
. |
. |
. |
. |
I | T | T | G | P | K | N | Q | A | L | E | Q | A | F | C | Q | L | T | G | N | Q | H | A | I | A | V | S | S | A | T | A | G | M | H | I | T | L | M | A | L | K | I | G | K | G | D | E |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   | . | . | . | . | . | . |   |   |   |   |
|   |   |   |   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |
|   |   |   |
|
|
|   |
|   |   |   |   |
|   |   |
|   |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |   |   |
| . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|
Template Sequence |   |
A | Q | T | V | V | I | G | T | P | . |
. |
. |
D | Q | M | A | N | S | A | S | T | L | W | Q | A | G | A | K | L | L | K | V | K | L | D | N | H | L | I | S | E | R | M | V | A | I | R | T | A | V | P | D | A | T | L | I | V | D | A | N | E | S | W | R | A | E | G | L | A | A | R | C | Q | L | L | A | D | L | G | V |
Template Known Secondary structure |   |
|  |  |  |
| S |
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
|
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |
| T | T |
|
|
| S | T | T |  |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
122 | . | . | . | . | . | . | . | 130 | |
|
|
. | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
  |
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | I | T | P | S | L | T | W | V | S | T | L | N | M | I | S | L | L | G | A | T | P | V | M | V | D | V | D | R | D | T | L | M | V | T | P | E | A | I | E | S | A | I | T | P | R | T | K | A | I | I | P | V | H | Y | A | G | A | P | A | D | I | D | A | I | R | A | I | G | E | R | Y | G | I | A | V | I | E | D | A |
Query Conservation |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   | . | . | . |
|
|
|
|   |
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|   |
|
|   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |
Template Sequence |   |
A | M | L | E | Q | P | L | P | A | Q | D | D | A | A | L | E | N | F | I | H | P | . |
. |
. |
L | P | I | C | A | D | E | S | C | H | T | R | S | N | L | K | A | L | K | G | R | Y | E | M | V | N | I | K | L | D | K | T | G | G | L | T | E | A | L | A | L | A | T | E | A | R | A | Q | G | F | S | L | M | L | G | C |
Template Known Secondary structure |   |
|  |  |  |
|
| S |
| T | T | S |
| G | G | G | G | S | S |
|
| S | . | . | . | S |
|  |  |  | S | T | T |
| S | S | G | G | G |  |  |  |  | B | T | T | B | S |  |  |  |  |
|  |  |  |  | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
| . | . | . |
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
199 | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | |
|
|
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . |
  |
  |   |
156 | . | . | . | 160 |
Predicted Secondary structure |   |
 |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
A | H | A | V | G |
Query Conservation |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
Template Sequence |   |
M | L | C | T | S |
Template Known Secondary structure |   |
| S |
|
|  |
Template Predicted Secondary structure |   |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
276 | . | . | . | 280 |
  |