Return to main results Retrieve Phyre Job Id

Job DescriptionP77690
Confidence99.97%DateThu Jan 5 12:31:41 GMT 2012
Rank39Aligned Residues315
% Identity16%Templated1ibja_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TTGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALKIGKGDEVITPSLTWVSTLNMISL. LGATPVMVDVDRDTLM
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Template Sequence  SGNPTRDALESLLAKLDKADRAFCFTSGMAALSAVT. HL. IKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKL
Template Known Secondary structure  T

T
SSS.TT.S
TT
SS

TSGGGT

TTS
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   130.........140.........150.........160..... .. ..170.........180.........190.........200.......
 
   109110.........120.........130.........140.........150.........160.........170.........180........
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Query Sequence  VTPEAIESAITPRTKAIIPVHYAGAPADIDAIRAIGERYGIAVIEDAAHAVGTYYKGRHIGAKGTAIFSFHAIKNITCAE
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Template Sequence  DEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPL. . . ELGADIVMHSATKFIAGHS
Template Known Secondary structure 

SS
SS
TTT




TTT

TTT
TTT

GG...GTT
STTTTTT
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   208.210.........220.........230.........240.........250.........260..... ....270.........280....
 
   189 190.........200.........210.........220.........230.........240.........250.........260.....
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Query Sequence  G. . . GLIVTDNENLARQLRMLKFHGLGVDAYDRQTWGRAPQAEVLTPGYKYNLTDINAAIALTQLVKLEHLNTRRREIAQ
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Template Sequence  DVMAGVLAVKGEKLAKEVYF. . . . . . . . . . . . . . . . . . . . . . . . LQNSEGSGLAPFDCWLCLRGIKTMALRIEKQQENAR
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S........................TT
B

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   285....290.........300.... .....310.........320.........330.........340
 
   266...270.........280.........290 .........300.........310.........320.........330...
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Query Sequence  QYQQALAALPFQPLSLPAWPHVHAW. . . . . . . . . . . . HLFIIRVDEQRCGISRDALMEALKERGIGTGLHFRAAHTQKYY
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Template Sequence  KIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVA. . . LSKHLVETTKYFSIAVSFGSVKSLISMPC
Template Known Secondary structure  T
TT


TTSTTSTTTTT
S


S
S
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TT
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   341........350.........360.........370.........380........ .390.........400.........410.......
 
   334..... 340.........350.........360.........370......
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Query Sequence  RERFPT. . LSLPNTEWNSERICSLPLFPDMTTADADHVITALQQL
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Template Sequence  FMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFKTF
Template Known Secondary structure  TTTT
S

SSSSSSSS

TT


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   418.420.........430.........440.........450.........460..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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