Job Description P77690 Confidence 99.91% Date Thu Jan 5 12:31:41 GMT 2012 Rank 161 Aligned Residues 328 % Identity 16% Template d1ejia_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.										.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.													.	.	.	.													.							.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.													.	.	.	.													.							.	.	.	.
Query Sequence		S	R	P	A	M	G	V	E	E	L	A	A	V	K	E	V	L	E	.	.	.	.	.	.	.	.	.	S	G	W	I	T	T	G	P	K	N	Q	A	.	.	.	.	L	E	Q	A	F	C	Q	L	T	G	N	Q	.	H	A	I	A	V	S	.	.	.	.	S	A	T	A	G	M	H	I	T	L	M	A	L	K
Query Conservation																				.	.	.	.	.	.	.	.	.													.	.	.	.													.							.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.													.	.	.	.													.							.	.	.	.														.
Template Conservation																																																																																	.
Template Sequence		S	E	N	F	A	S	R	A	V	L	E	A	L	G	S	S	L	N	N	K	Y	S	E	G	Y	P	G	Q	R	Y	Y	G	G	T	E	F	I	D	E	L	E	X	L	C	Q	K	R	A	L	Q	A	Y	H	L	D	P	Q	C	W	G	V	N	V	Q	P	Y	S	G	S	P	A	N	F	A	V	Y	T	A	L	.
Template Known Secondary structure		T													T	S	G	G	G	G					S		S	S	S		S	S	S																				T	T			T	T	T								S	S													.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.											.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.																							.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.																							.	.
Query Sequence		I	G	K	G	D	E	V	I	T	P	S	L	T	W	V	S	T	L	N	M	I	S	L	L	G	A	T	P	V	.	.	.	.	.	.	.	.	.	.	M	V	D	V	D	R	D	T	L	M	V	T	P	E	A	I	E	S	A	I	T	P	.	.	R	T	K	A	I	I	P	V	H	Y	A	G	A	P	A	D	I
Query Conservation																															.	.	.	.	.	.	.	.	.	.																							.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation
Template Sequence		V	E	P	H	G	R	I	X	G	L	D	L	P	D	G	G	H	L	T	H	G	F	X	T	D	K	K	K	I	S	A	T	S	I	F	F	E	S	X	P	Y	K	V	Y	P	E	T	G	Y	I	N	Y	D	Q	L	E	E	N	A	S	L	F	H	P	K	L	I	I	A	G	T	S	C	Y	S	R	N	L	D	Y
Template Known Secondary structure		T		T	T								G	G	G	T			G	G	G			B		S	S		B		S						S							B		T	T	T		S	B															S							S	S			S
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.															.	.	200	.	.
Predicted Secondary structure																																				.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	I	R	A	I	G	E	R	Y	G	I	A	V	I	E	D	A	A	H	A	V	G	T	Y	Y	K	G	R	H	I	G	A	K	.	G	T	A	I	F	S	F	H	A	I	K	N	I	T	C	A	E	G	G	L	I	V	T	D	N	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	A	R	Q
Query Conservation																																				.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	R	L	R	K	I	A	D	D	N	G	A	Y	L	X	A	D	X	A	H	I	S	G	L	V	A	A	G	V	V	P	S	P	F	E	H	C	H	V	V	T	T	T	T	H	K	T	L	R	G	C	R	A	G	X	I	F	Y	R	K	G	V	R	S	V	D	P	K	T	G	K	E	T	Y	Y	E	L	E	S	L
Template Known Secondary structure											T	T								G	G	G						T	T	S	S			G	G	G	T		S						S	S	G	G	G				S															S	T	T
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	M	L	K	F	H	G	L	G	V	D	A	Y	D	R	Q	T	W	G	R	A	P	Q	A	E	V	L	T	P	G	Y	K	Y	N	L	T	D	I	N	A	A	I	A	L	T	Q	L	V	K	L	E	H	L	N	T	R	R	R	E	I	A	Q	Q	Y	Q	Q	A	L	A	A	L	P	F	Q	P	L	S	L	P
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	N	S	A	V	F	P	G	L	Q	G	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	N	H	A	I	A	G	V	A	V	A	L	K	Q	A	X	T	T	E	F	K	I	Y	Q	L	Q	V	L	A	N	C	R	A	L	S	D	A	L	T	E	L	G	Y	K	I	V	T	G	G
Template Known Secondary structure							T	T	T	T			S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	S																								T	T			B	T	T	S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.																			.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.					.	.
Predicted Secondary structure																																																																												.	.	.	.
Query SS confidence																																																																												.	.	.	.
Query Sequence		A	W	P	H	V	H	A	W	H	L	F	I	I	R	V	D	E	Q	R	C	G	I	S	R	D	A	L	M	E	A	L	K	E	R	G	I	G	T	G	L	H	F	R	A	A	H	T	Q	K	Y	Y	R	E	R	F	P	T	L	S	L	P	N	T	E	W	N	S	E	R	I	C	S	L	P	.	.	.	.	L	F
Query Conservation																																																																												.	.	.	.
Alig confidence						.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.
Template Conservation						.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	D	N	H	.	.	.	.	.	.	.	L	I	L	X	D	L	R	S	K	G	T	D	G	G	R	A	E	K	V	L	E	A	C	S	I	A	C	N	K	N	T	C	P	G	D	K	S	A	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	G	L	R	L	G	T	P	A	L	T	S
Template Known Secondary structure			S	S	S	.	.	.	.	.	.	.						G	G	G	G	T													T	T				B					S	S	S	S		T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S											T
Template Predicted Secondary structure						.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		354	.	.	.								.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.																	.	.	400	.	.	.	.	.	.	.	.	.	410
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	M	T	T	A	D	A	D	H	V	I	T	A	L	Q	Q	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	L	L	E	E	D	F	Q	K	V	A	H	F	I	H	R	G	I
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions