Job Description P77690 Confidence 99.90% Date Thu Jan 5 12:31:41 GMT 2012 Rank 178 Aligned Residues 349 % Identity 15% Template d1ax4a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 2.10

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																										.	.																																																	.	.	.	.	.	.
Query SS confidence																										.	.																																																	.	.	.	.	.	.
Query Sequence		F	L	P	F	S	R	P	A	M	G	V	E	E	L	A	A	V	K	E	V	L	E	S	G	.	.	W	I	T	T	G	P	K	N	Q	A	L	E	Q	A	F	C	Q	L	T	G	N	Q	H	A	I	A	V	S	S	A	T	A	G	M	H	I	T	L	M	A	L	K	I	G	K	G	D	E	.	.	.	.	.	.
Query Conservation																										.	.																																																	.	.	.	.	.	.
Alig confidence																										.	.																																										.							.	.	.	.	.	.
Template Conservation																																																																					.
Template Sequence		Y	I	D	L	L	T	D	S	G	T	N	A	M	S	D	H	Q	W	A	A	M	I	T	G	D	E	A	Y	A	G	S	R	N	Y	Y	D	L	K	D	K	A	K	E	L	F	N	Y	D	Y	I	I	P	A	H	Q	G	R	G	A	E	N	I	L	F	P	V	L	.	L	K	Y	K	Q	K	E	G	K	A	K	N
Template Known Secondary structure		S				S		S	S	S														T					S	S	S																								S	S													.							T	T			S	S
Template Predicted Secondary structure																																																																					.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.
			76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.														.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure		.																															.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Query SS confidence		.																															.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Query Sequence		.	V	I	T	P	S	L	T	W	V	S	T	L	N	M	I	S	L	L	G	A	T	P	V	M	V	D	V	D	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	M	V	T	P	E	A	I	E	S	A	I	T	P	R	T	K	A	I	I	P	V	H	Y	A	G	A	P	A	.	.	.	.	.	.
Query Conservation		.																															.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Alig confidence		.																															.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Template Conservation
Template Sequence		P	V	F	I	S	N	F	H	F	D	T	T	A	A	H	V	E	L	N	G	C	K	A	I	N	I	V	T	E	K	A	F	D	S	E	T	Y	D	D	W	K	G	D	F	D	I	K	K	L	K	E	N	I	A	Q	H	G	A	D	N	I	V	A	I	V	S	T	V	T	C	N	S	A	G	G	Q	P	V	S	M
Template Known Secondary structure							S	S												T	T							B		G	G	G	G		T	T	S			T	T	T	T		B														G	G	G								S	S	B	T	T	T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
			136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.																.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	D	I	D	A	I	R	A	I	G	E	R	Y	G	I	A	V	I	E	D	A	A	H	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	T	Y	Y	K	G	R	H	I	G	A	K	G	T	A	I	F	S	F	H	A	I	K	N	I	T	C	A	E	G	G	L	I	V	T	D	N	E	N	L
Query Conservation		.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																																																														.
Template Sequence		S	N	L	K	E	V	Y	E	I	A	K	Q	H	G	I	F	V	V	M	D	S	A	R	F	C	E	N	A	Y	F	I	K	A	R	D	P	K	Y	K	N	A	T	I	K	E	V	I	F	D	M	Y	K	Y	A	D	A	L	T	M	S	.	A	K	D	P	L	L	N	I	G	G	L	V	A	I	R	D	N	E	E
Template Known Secondary structure															T								T	T													G	G	G	T	T											G	G	G		S						.							S	S							S	S
Template Predicted Secondary structure																																																														.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	Q	L	R	M	L	K	F	H	G	L	G	V	D	A	Y	D	R	Q	T	W	G	R	A	P	Q	A	E	V	L	T	P	G	Y	K	Y	N	L	T	D	I	N	A	A	I	A	L	T	Q	L	V	K	L	E	H	L	N	T	R	R	R	E	I	A	Q	Q	Y	Q	Q	A	L	A	A	L	P	F	Q	P	L
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.
Template Sequence		I	F	T	L	A	R	Q	R	C	V	P	M	E	G	F	V	T	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	L	A	G	R	D	M	A	A	M	V	Q	G	L	E	E	G	T	E	E	E	Y	L	H	Y	R	I	G	Q	V	K	Y	L	G	D	R	L	R	E	A	.	G	I	P	I
Template Known Secondary structure														T		S	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T																T	T																						T	.	T			B
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.																	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		S	L	P	A	W	P	H	V	H	A	W	H	L	F	I	I	R	V	D	E	Q	R	C	G	I	S	R	D	A	L	M	E	A	L	K	E	R	.	G	I	G	T	G	L	H	F	R	A	A	H	T	Q	K	Y	Y	R	E	R	F	P	T	L	S	L	P	N	T	E	W	N	S	E	R	I	C	S	L	P	L	F
Query Conservation																																							.
Alig confidence																																							.																										.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.
Template Sequence		Q	Y	P	T	G	G	H	A	V	F	V	D	C	K	K	L	V	P	Q	I	P	G	D	Q	F	P	A	Q	A	V	I	N	A	L	Y	L	E	S	G	V	R	A	V	E	I	G	S	F	L	L	G	R	D	P	A	T	G	E	Q	K	H	A	D	.	.	.	.	.	.	.	.	M	E	F	M	R	L	T	I	A
Template Known Secondary structure			S	S			S	S						S	T	T	T		T	T	S		G	G	G																						S						B		T	T	T		S	B				S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.									410	.	.	.	.	.	.	.	.
		359	360	.		.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		P	D	M	.	T	T	A	D	A	D	H	V	I	T	A	L	Q	Q	L	A	G	Q
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		R	R	V	Y	T	N	D	H	M	D	Y	I	A	D	A	L	I	G	L	K	E	K
Template Known Secondary structure		T	T	S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions