Job Description P77690 Confidence 99.93% Date Thu Jan 5 12:31:41 GMT 2012 Rank 141 Aligned Residues 311 % Identity 10% Template c3qm2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: 2.25 angstrom crystal structure of phosphoserine aminotransferase2 (serc) from salmonella enterica subsp. enterica serovar typhimurium Resolution 2.25 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																												.	.	.						.
Query SS confidence																																												.	.	.						.
Query Sequence		S	R	P	A	M	G	V	E	E	L	A	A	V	K	E	V	L	E	S	G	W	I	T	T	G	P	K	N	Q	A	L	E	Q	A	F	C	Q	L	T	G	N	Q	.	.	.	H	A	I	A	V	.	S	S	A	T	A	G	M	H	I	T	L	M	A	L	K	I	G	K	G	D	E	V	I	T	P	S	L	T	W
Query Conservation																																												.	.	.						.
Alig confidence																	.	.	.	.	.	.	.	.	.	.																		.	.	.						.															.
Template Conservation																	.	.	.	.	.	.	.	.	.	.																																									.
Template Sequence		G	P	A	M	L	P	A	E	V	L	K	L	A	Q	Q	.	.	.	.	.	.	.	.	.	.	E	V	A	E	E	A	E	Q	D	F	R	D	L	L	N	I	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	G	V	P	L	N	L	.	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y
Template Known Secondary structure		S	S												T		.	.	.	.	.	.	.	.	.	.															T			T	T								S		T	T											.		T	T									S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.																																									.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.											.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.						.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.																			.
Query SS confidence															.	.	.	.	.																			.
Query Sequence		V	S	T	L	N	M	I	S	L	L	G	A	T	.	.	.	.	.	P	V	M	V	D	V	D	R	D	T	L	M	V	T	P	E	A	I	.	E	S	A	I	T	P	R	T	K	A	I	I	P	V	H	Y	A	G	A	P	A	D	I	D	A	I	R	A	I	G	E	R	Y	G	I	A	V	I	E	D	A	A	H
Query Conservation															.	.	.	.	.																			.
Alig confidence															.	.	.	.	.																			.																							.	.								.	.
Template Conservation																																																													.	.								.	.
Template Sequence		W	A	A	S	A	I	K	E	A	K	K	Y	C	A	P	Q	I	I	D	A	K	I	T	V	D	G	K	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	L	H	Y	C	P	N	E	T	I	D	G	I	A	I	D	.	.	E	T	P	D	F	G	P	.	.	E	V	V	V	T	A	D	F	S	S
Template Known Secondary structure											T	T	T	S												T	T							G	G	G					T	T		S						S			T	T	T	T					.	.							T	.	.	T								T	T
Template Predicted Secondary structure																																																													.	.								.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	G	T	Y	Y	K	G	R	H	I	G	A	K	G	T	A	I	F	S	F	H	A	I	K	N	I	T	C	A	E	G	G	L	I	V	T	D	N	E	N	L	A	R	Q	L	R	M	L	K	F	H	G	L	G	V	D	A	Y	D	R	Q	T	W	G	R	A	P	Q	A	E	V	L	T	P	G	Y	K	Y	N
Query Conservation
Alig confidence												.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	I	L	S	A	P	L	D	V	S	.	.	.	.	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	L	T	L	V	I	V	R	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	G	K	A	H	E	S	C	P	S	I	L	D	Y	T	V	L	N	D	N	P	T	F	A	W
Template Known Secondary structure		T	T	T	S	S				G	G	.	.	.	.	G		S						T	T	T	T	T			T	T								G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G		S				T	T	S		G	G	G											S
Template Predicted Secondary structure												.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.															.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	D	I	N	A	A	I	A	L	T	Q	L	V	K	L	E	H	L	N	T	R	R	R	E	I	A	Q	Q	Y	Q	Q	A	L	A	A	L	P	F	Q	P	L	S	L	P	A	W	P	H	V	H	A	W	H	L	F	I	I	R	V	D	E	Q	R	C	G	I	S	R	D	A	L	M	E	A	L	K	E	R	G
Query Conservation
Alig confidence																																																												.	.	.	.	.
Template Conservation																																																												.	.	.	.	.
Template Sequence		Y	L	S	G	L	V	F	K	W	L	K	A	Q	G	G	V	A	A	M	H	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	Q	A	N	R	S	R	M	N	V	P	F	Q	L	.	.	.	.	.	A	D	N	T	L	D	K	V	F	L	E	E	S	F	A	A	G
Template Known Secondary structure															T																						T		S	S					B		G	G	G	B		S	S							.	.	.	.	.	S	S	G	G	G											T	T
Template Predicted Secondary structure																																																												.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.						.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	T	G	L	H	F	R	A	A	H	T	Q	K	Y	Y	R	E	R	F	P	T	L	S	L	P	N	T	E	W	N	S	E	R	I	C	S	L	P	L	F	P	D	M	T	T	A	D	A	D	H	V	I	T	A	L	Q	Q	L	A	G	Q
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	H	A	L	K	G	H	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	G	M	R	A	S	I	Y	N	A	M	P	I	E	G	V	K	A	L	T	D	F	M	I	D	F	E	R	R
Template Known Secondary structure						B			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S							T	T	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		322	.	.	.	.	.	.	.	330																								.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions