Job Description P77690 Confidence 99.92% Date Thu Jan 5 12:31:41 GMT 2012 Rank 159 Aligned Residues 304 % Identity 14% Template c3pplB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aspartate aminotransferase; PDBTitle: crystal structure of an aspartate transaminase (ncgl0237, cgl0240)2 from corynebacterium glutamicum atcc 13032 kitasato at 1.25 a3 resolution Resolution 1.25 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.															.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																							.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	I	T	T	G	P	K	N	Q	A	L	E	Q	A	F	C	Q	L	T	G	N	.	.	Q	H	A	I	A	V	S	S	A	T	A	G	M	H	I	T	L	M	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	I	G	K	G	D	E	V	I	T	P	S	L	T	W	V	S	T	L	N	M	I	S
Query Conservation																							.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.		.
Template Conservation																																																											.
Template Sequence		N	Y	G	G	L	D	G	I	V	D	I	R	Q	I	W	A	D	L	L	G	V	P	V	E	Q	V	L	A	G	D	A	S	S	L	N	I	X	F	D	V	I	S	W	S	Y	I	F	G	N	N	D	S	V	Q	P	W	S	.	K	E	E	T	V	K	W	I	C	P	V	P	G	Y	D	R	H	F	S	I	T	E
Template Known Secondary structure		S	S			S	S														T	S		G	G	G					S	S																			T	T		S	S		G	G	.	G	S	S									S
Template Predicted Secondary structure																																																											.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																.	.	.																.	.	.							.
Query SS confidence																																.	.	.																.	.	.							.
Query Sequence		L	L	G	A	T	P	V	M	V	D	V	D	R	D	T	L	M	V	T	P	E	A	I	E	S	A	I	T	P	R	.	.	.	T	K	A	I	I	P	V	H	Y	A	G	A	P	A	D	.	.	.	I	D	A	I	R	A	.	I	G	E	R	Y	G	I	A	V	I	E	D	A	A	H	A	V	G	T	Y	Y	K
Query Conservation																																.	.	.																.	.	.							.
Alig confidence																																.	.	.																.	.	.							.
Template Conservation
Template Sequence		R	F	G	F	E	X	I	S	V	P	X	N	E	D	G	P	D	X	D	A	V	E	E	L	V	K	N	P	Q	V	K	G	X	W	V	V	P	V	F	S	N	P	T	G	F	T	V	T	E	D	V	A	K	R	L	S	A	X	E	T	A	A	P	D	F	R	V	V	W	D	N	A	Y	A	V	H	T	L	T	D
Template Known Secondary structure			T	T										T	T											T	T	S	T	T									S	S		T	T	T																		S	S	T	T								T	T	T	T		B	S	S	S
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		165	.	.	.												.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	R	H	I	.	.	.	.	.	.	.	.	.	.	.	G	A	K	G	T	A	I	F	S	F	H	A	I	K	N	I	T	C	A	E	G	G	L	I	V	T	D	N	E	N	L	A	R	Q	L	R	M	L	K	F	H	G	L	G	V	D	A	Y	D	R	Q	T	W	G	R	A	P	Q	A	E	V	L	T	P	G
Query Conservation						.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	F	P	E	V	I	D	I	V	G	L	G	E	A	A	G	N	P	N	R	F	W	A	F	T	S	T	S	K	I	T	L	A	G	A	G	V	S	F	F	L	T	S	A	E	N	R	K	W	Y	T	G	H	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	G	I
Template Known Secondary structure																T	T		T	T								S	T	T	T	S		T	T	T	S																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.																						.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.									.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.
Query Sequence		Y	K	Y	N	L	T	D	I	N	A	A	I	A	L	T	Q	L	V	K	L	E	H	.	.	.	.	.	.	.	.	L	N	T	R	R	R	E	I	A	Q	Q	Y	Q	Q	A	L	A	A	L	P	F	Q	P	L	S	L	P	A	W	P	H	V	H	A	W	H	L	F	I	I	R	V	D	E	Q	R	C	G	I	S
Query Conservation																								.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.																																.	.	.	.	.									.	.	.	.
Template Conservation																																																															.	.	.	.	.									.	.	.	.
Template Sequence		G	P	N	K	V	N	Q	L	A	H	A	R	Y	F	G	D	A	E	G	V	R	A	V	X	R	K	H	A	A	S	L	A	P	K	F	N	K	V	L	E	I	L	D	S	R	L	A	E	Y	G	V	A	Q	W	T	V	P	A	G	G	Y	.	.	.	.	.	F	I	S	L	D	V	V	P	.	.	.	.	G	T
Template Known Secondary structure																	S																															G	G	G	T								S	B	S	S	.	.	.	.	.							S	T	.	.	.	.	T
Template Predicted Secondary structure																																																															.	.	.	.	.									.	.	.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350						.	.	.	.	.	.	.	.					.	360
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	A	L	M	E	A	L	K	E	R	G	I	G	T	G	L	H	F	R	A	A	H	T	Q	K	Y	Y	R	E	R	F	P	T	L	S	L	P	N	T	E	W	N	S	E	R	I	C	S	L	P	L	F	P	D	M	T	T	A	D	A	D	H	V	I	T	A	L	Q	Q	L	A	G
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		A	S	R	V	A	E	L	A	K	E	A	G	I	A	L	T	G	A	G	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	L	R	Q	D	P	E	N	K	N	L	R	L	A	P	S	.	L	P	P	V	E	E	L	E	V	A	X	D	G	V	A	T	C	V	L
Template Known Secondary structure												T	T						T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	G	G			T	T	S								S	.	S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.																.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions