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Job DescriptionP77690
Confidence99.97%DateThu Jan 5 12:31:41 GMT 2012
Rank32Aligned Residues330
% Identity18%Templatec3ndnC_
PDB info PDB header:lyaseChain: C: PDB Molecule:o-succinylhomoserine sulfhydrylase; PDBTitle: crystal structure of o-succinylhomoserine sulfhydrylase from2 mycobacterium tuberculosis covalently bound to pyridoxal-5-phosphate
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GVEELAAVKEVLESGWITT. . . GPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALKIGKGDEVITPSLTWVS. . . .
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Template Sequence  SAAVAEKSFAGELDHYVYSRYGNPTVSVFEERLRLIEGAPAAFATASGMAAVFTSLGAL. LGAGDRLVAARSLFGSCFVV
Template Known Secondary structure  STTSS



BTTT

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Query Sequence  TLNMISLLGATPVMVDVDRDTLMVTPEAIESAITPRTKAIIPVHYAGAPADIDAIRAIGERYGIAVIEDAAHAVGTYYKG
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Template Sequence  CSEILPRWGVQTVFVDGD. . . DLSQWERALSVPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQG
Template Known Secondary structure  TTT

TT...
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Query Sequence  RHIGAKGTAIFSFHAIKNITCAE. . GGLIVTDNENLARQLRMLKFHGLGVDAYDRQTWGRAPQAEVLTPGYKYNLTDINA
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Template Sequence  F. . . PLGVDVVVYSGTHIDGQGRVLGGAILGDREYIDGPVQK. . . . . . . . . . . . . . . . . . . . . . . . LMRHTGPAMSAFNA
Template Known Secondary structure  G...GGT
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   206 ...210.........220.........230.........240.... .....250........
 
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Query Sequence  AIALTQLVKLEHLNTRRREIAQQYQQALAALPFQPLSLPAWPHVHA. . . . . . . . . . . . . . WHLFIIRVDEQRCGISRDAL
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Template Sequence  WVLLKGLETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEV
Template Known Secondary structure  T
TT
TTSTTSTT
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   260.........270.........280.........290.........300.........310.........320.........330.........
 
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Query Sequence  MEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNS. . ERICSLPLFPDMTTADADHVITAL
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Template Sequence  LDKMRLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGLEDTDDLIADIDRAL
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GGGTTTSTTTTT

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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