Job Description P77690 Confidence 99.96% Date Thu Jan 5 12:31:41 GMT 2012 Rank 62 Aligned Residues 327 % Identity 18% Template c3n0lA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine hydroxymethyltransferase; PDBTitle: crystal structure of serine hydroxymethyltransferase from2 campylobacter jejuni Resolution 1.80 Å

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		2	.	.	.	.	.			.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.										.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure								.	.																			.	.	.	.	.	.	.	.	.																	.	.	.	.											.
Query SS confidence								.	.																			.	.	.	.	.	.	.	.	.																	.	.	.	.											.
Query Sequence		S	E	F	L	P	F	.	.	S	R	P	A	M	G	V	E	E	L	A	A	V	K	E	V	L	E	.	.	.	.	.	.	.	.	.	S	G	W	I	T	T	G	P	K	N	Q	A	L	E	Q	A	.	.	.	.	F	C	Q	L	T	G	N	Q	H	A	.	I	A	V	S	S	A	T	A	G	M	H	I	T	L
Query Conservation								.	.																			.	.	.	.	.	.	.	.	.																	.	.	.	.											.
Alig confidence								.	.																			.	.	.	.	.	.	.	.	.																	.	.	.	.											.
Template Conservation
Template Sequence		C	E	G	L	E	X	I	A	S	E	N	F	T	L	P	E	V	X	E	V	X	G	S	I	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	F	V	D	E	I	E	T	L	A	I	E	R	C	K	K	L	F	N	C	K	F	A	N	V	Q	P	N	S	G	S	Q	A	N	Q	G	V	Y
Template Known Secondary structure				S					T	T													T	S	G	G	G	G							T	T			S	S	S																					T		S							S	S
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	L	K	I	G	K	G	D	E	V	I	T	P	S	L	T	W	V	S	T	L	N	M	I	S	L	L	G	A	T	P	V	M	V	D	V	D	R	D	T	L	M	V	T	P	E	A	I	E	S	A	I	T	P	R	T	K	A	I	I	P	V	H	Y	A	G	A	P	A	D	I	D	A	I	R	A	I	G	E
Query Conservation
Alig confidence					.															.	.	.	.	.	.	.	.	.																																				.
Template Conservation					.															.	.	.	.	.	.	.	.	.																																				.
Template Sequence		A	A	L	.	I	N	P	G	D	K	I	L	G	X	D	L	K	X	.	.	.	.	.	.	.	.	.	Y	E	S	C	F	Y	G	V	E	L	D	G	R	I	D	Y	E	K	V	R	E	I	A	K	K	E	K	P	K	L	I	V	C	G	A	.	S	A	Y	A	R	V	I	D	F	A	K	F	R	E	I	A	D
Template Known Secondary structure					.	S		T	T											.	.	.	.	.	.	.	.	.	S									T	T	S	S																S							.	S	S			S
Template Predicted Secondary structure					.															.	.	.	.	.	.	.	.	.																																				.
Template SS confidence
		102	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.										.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		R	Y	G	I	A	V	I	E	D	A	A	H	A	V	G	T	Y	Y	K	G	R	H	I	G	A	K	.	G	T	A	I	F	S	F	H	A	I	K	N	I	T	C	A	E	G	G	L	I	V	T	D	N	E	N	L	A	R	Q	L	R	M	L	K	F	H	G	L	G	V	D	A	Y	D	R	Q	T	W	G	R	A
Query Conservation																												.
Alig confidence																												.																																													.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		E	I	G	A	Y	L	F	A	D	I	A	H	I	A	G	L	V	V	A	G	E	H	P	S	P	F	P	Y	A	H	V	V	S	S	T	T	H	K	T	L	R	G	P	R	G	G	I	I	X	T	N	D	E	E	L	A	K	K	I	N	S	A	I	F	P	G	I	Q	G	G	P	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T								T	T	T						T	T	S	S				T	T	T		S						S	S	T	T	T		S		S							S													T	T	T	T		S	S		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	A	E	V	L	T	P	G	Y	K	Y	N	L	T	D	I	N	A	A	I	A	L	T	Q	L	V	K	L	E	H	L	N	T	R	R	R	E	I	A	Q	Q	Y	Q	Q	A	L	A	A	L	P	F	Q	P	L	S	L	P	A	W	P	H	V	H	A	W	H	L	F	I	I	R	V	D	E	Q	R	C	G	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	L	X	H	V	I	A	A	K	A	V	G	F	K	F	N	L	S	D	E	W	K	V	Y	A	K	Q	V	R	T	N	A	Q	V	L	A	N	V	L	X	D	R	K	F	K	L	V	S	D	G	T	D	N	H	.	.	.	.	.	.	.	L	V	L	X	S	F	L	D	R	E	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.																T	S																								T	T				G	G	G	S		S	S	S	.	.	.	.	.	.	.							T	T	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.
Template SS confidence
											258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310								.	.	.	.	.	.	.	.	.	320	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.					.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.
Query SS confidence																																																								.	.	.	.
Query Sequence		S	R	D	A	L	M	E	A	L	K	E	R	G	I	G	T	G	L	H	F	R	A	A	H	T	Q	K	Y	Y	R	E	R	F	P	T	L	S	L	P	N	T	E	W	N	S	E	R	I	C	S	L	P	L	F	.	.	.	.	P	D	M	T	T	A	D	A	D	H	V	I	T	A	L	Q	Q	L	A	G	Q
Query Conservation																																																								.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	G	K	D	A	D	L	A	L	G	N	A	G	I	T	A	N	K	N	T	V	P	G	E	I	R	S	P	F	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	G	L	R	L	G	T	P	A	L	T	A	R	G	F	K	E	K	E	X	E	I	V	S	N	Y	I	A	D	I	L	D	D
Template Known Secondary structure													T	T									T	T			S		T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S												T	T																			T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.																.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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