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Job DescriptionP77690
Confidence99.87%DateThu Jan 5 12:31:41 GMT 2012
Rank205Aligned Residues328
% Identity13%Templatec3mebB_
PDB info PDB header:transferaseChain: B: PDB Molecule:aspartate aminotransferase; PDBTitle: structure of cytoplasmic aspartate aminotransferase from giardia2 lamblia
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20........ .30.........40...... ...50.........60........ .
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Query Sequence  PFSRPAMGVEELAAVKEVLESGW. . . . . ITTGPKNQALEQAFCQLT. . . . . . . . . . GNQHAIAVSSATAGMHITLMAL. K
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Template Sequence  ESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHL
Template Known Secondary structure  TTS




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   41........50.........60.........70.........80.........90.........100.........110.........120
 
   70.........80.........90.........100.. .......110...... ...120.........130......
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Query Sequence  IGKGDEVITPSLTWVSTLNMISLLGATPVMVDV. . . . . . DRDTLMVTPEAIES. . . . . . AITPRTKAIIPVHYAGAPAD.
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Template Sequence  WMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTE
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   121........130.........140.........150.........160.........170.........180.........190.........200
 
   137..140.........150.........160....... ..170.........180........ .190.........200....
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Query Sequence  . . IDAIRAIGERYGIAVIEDAAHAVGTYYKGRH. . . . . . . . IGAKGTAIFSFHAIKNITCAE. . GGLIVTDNENLARQLR
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Template Sequence  AQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVE
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   201........210.........220.........230.........240.........250.........260.........270.........280
 
   205....210.........220.........230.........240.........250.. .......260.........270....
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Query Sequence  MLKFHGLGVDAYDRQTWGRAPQAEVLTPGYKYNLTDINAAIALTQLVK. . . . . . . . . . LEHLNTRRREIAQQYQQALAAL
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Template Sequence  K. . . . . . . . . . NKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKR
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   281 ........290.........300.........310.........320.........330.........340.........350
 
   275....280....... ..290.........300.........310.........320.........330.........340.........350.
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Query Sequence  PFQPLSLPAWPHV. . . HAWHLFIIRVDEQRCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSER
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Template Sequence  . KTPGPGSKGTWDHILTAIGMFTF. . . . . . TGLTPEHVDYLKEKWSIYLVKAG. . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  .T


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   351........360.........370... ......380.........390......
 
   352.......360.........370.........
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Query Sequence  ICSLPLFPDMTTADADHVITALQQLAGQ
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Template Sequence  . GRMSM. CGLTESNCDYVAEAIHDAVTK
Template Known Secondary structure  .GG.GG

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   397..400. ........410.........420..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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