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Job DescriptionP77690
Confidence99.97%DateThu Jan 5 12:31:41 GMT 2012
Rank37Aligned Residues330
% Identity18%Templatec3l8aB_
PDB info PDB header:lyaseChain: B: PDB Molecule:putative aminotransferase, probable beta-cystathionase; PDBTitle: crystal structure of metc from streptococcus mutans
Resolution1.54 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SEFLPF. . SRPAMG. . VEELAAVKEVLESGWITTGPKNQALEQAFCQLTGN. . . . . . . . QHAIAVSSATAGMHITLMALK
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Template Sequence  PELLQMWVADMDFLPVPEIKEAIINYGREHIFGYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAF.
Template Known Secondary structure  TT


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   27..30.........40.........50.........60.........70.........80.........90.........100.....
 
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Query Sequence  IGKGDEVITPSLTWVSTLNMISLLGATPVMVDVDR. . . . . . DTLMVTPEAIESAITPRTKAIIPVHYAGAPAD. . . IDAI
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Template Sequence  SEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKI
Template Known Secondary structure  S
TS

TT
TT

TTSSBTTTTB


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   106...110.........120.........130.........140.........150.........160.........170.........180.....
 
   141........150.........160........ .170.........180........ .190.........200.........210.
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Query Sequence  RAIGERYGIAVIEDAAHAVGTYYKGRHI. . . . . . . GAKGTAIFSFHAIKNITCAE. . GGLIVTDNENLARQLRMLKFHGL
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Template Sequence  AELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLANN
Template Known Secondary structure  T

TTTT
B
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TTGGGT
ST
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STT
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   186...190.........200.........210.........220.........230.........240.........250.........260.....
 
   212.......220.........230.........240.........250.........260.........270.........280.........290.
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Query Sequence  GVDAYDRQTWGRAPQAEVLTPGYKYNLTDINAAIALTQLVKLEHLNTRRREIAQQYQQALAALPFQPLSLPAWPHVHAWH
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Template Sequence  Q. . . . . . . . . . . . . . . . . . . HEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTY. . . . .
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   292.......300.........310...... ...320.........330.........340.........350.........360.........370
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Query Sequence  LFIIRVDEQRCGISRDALMEALKER. GIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTTADADHVI
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Template Sequence  . . LVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHF. . . . . . . . . . . . . . . . . . . GKEGKYFARLNVA. . TPKNTVQEAL
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GGGT

TTTS

GGGG...................
GGGTT

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   322.......330.........340.........350..... ....360........ .370........
 
   371........
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Query Sequence  TALQQLAGQ
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Template Sequence  SRIISVFGK
Template Known Secondary structure  S

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   379380.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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