Job Description P77690 Confidence 99.96% Date Thu Jan 5 12:31:41 GMT 2012 Rank 74 Aligned Residues 323 % Identity 16% Template c3f9tB_ PDB info PDB header:lyase Chain: B: PDB Molecule:l-tyrosine decarboxylase mfna; PDBTitle: crystal structure of l-tyrosine decarboxylase mfna (ec 4.1.1.25)2 (np_247014.1) from methanococcus jannaschii at 2.11 a resolution Resolution 2.11 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.							.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.																		.	.																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.																		.	.																				.	.	.	.	.	.	.	.	.	.
Query Sequence		F	S	R	P	A	M	G	V	E	E	L	A	A	V	K	E	V	L	E	S	G	W	I	T	T	G	.	.	.	.	.	.	P	K	N	Q	A	L	E	Q	A	F	C	Q	L	T	G	N	Q	.	.	H	A	I	A	V	S	S	A	T	A	G	M	H	I	T	L	M	A	L	.	.	.	.	.	.	.	.	.	.
Query Conservation																												.	.	.	.	.	.																		.	.																				.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.																		.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	X	C	S	N	V	L	P	I	T	R	K	I	V	D	I	F	L	E	T	N	L	G	D	P	G	L	F	K	G	T	K	L	L	E	E	K	A	V	A	L	L	G	S	L	L	N	N	K	D	A	Y	G	H	I	V	S	G	G	T	E	A	N	L	X	A	L	R	C	I	K	N	I	W	R	E	K	R	R	K
Template Known Secondary structure			S						T										T	T			T	T	S	G	G	G																			T	T		T	T							S																							T
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
				69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure		.	.																																																											.	.	.
Query SS confidence		.	.																																																											.	.	.
Query Sequence		.	.	K	I	G	K	G	D	E	V	I	T	P	S	L	T	W	V	S	T	L	N	M	I	S	L	L	G	A	T	P	V	M	V	D	V	D	R	D	T	L	M	V	T	P	E	A	I	E	S	A	I	T	P	R	T	K	A	I	I	.	.	.	P	V	H	Y	A	G	A	P	A	D	I	D	A	I	R	A	I
Query Conservation		.	.																																																											.	.	.
Alig confidence		.	.																																																											.	.	.
Template Conservation
Template Sequence		G	L	S	K	N	E	H	P	K	I	I	V	P	I	T	A	H	F	S	F	E	K	G	R	E	X	X	D	L	E	Y	I	Y	A	P	I	K	E	D	Y	T	I	D	E	K	F	V	K	D	A	V	E	D	Y	D	V	D	G	I	I	G	I	A	G	T	T	E	L	G	T	I	D	N	I	E	E	L	S	K	I
Template Known Secondary structure		T					S	S							T	T			T										T								B		T	T	S	S	B												S									B	S		T	T	T			B
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.												.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		G	E	R	Y	G	I	A	V	I	E	D	A	A	H	A	V	G	T	Y	Y	K	G	R	H	I	G	A	K	.	.	.	.	.	.	.	.	.	.	.	G	T	A	I	F	S	F	H	A	I	K	N	I	T	C	A	E	G	.	G	L	I	V	T	D	N	E	N	L	A	R	Q	L	R	M	L	K	F	H	G	L
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation
Template Sequence		A	K	E	N	N	I	Y	I	H	V	D	A	A	F	G	G	L	V	I	P	F	L	D	D	K	Y	K	K	K	G	V	N	Y	K	F	D	F	S	L	G	V	D	S	I	T	I	D	P	H	K	X	G	H	C	P	I	P	S	G	G	I	L	F	K	D	I	G	Y	K	R	Y	L	D	V	D	A	P	Y	L	T
Template Known Secondary structure						T								T	T	G	G	G	T	G	G	G			G	G	G			T	T						S	G	G	G	T		S						T	T	T	T	T				S	S							S	S	G	G	G	G	G	G	T					T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	D	A	Y	D	R	Q	T	W	G	R	A	P	Q	A	E	V	L	T	P	G	Y	K	Y	N	L	T	D	I	N	A	A	I	A	L	T	Q	L	V	K	L	E	H	L	N	T	R	R	R	E	I	A	Q	Q	Y	Q	Q	A	L	A	A	L	P	F	Q	P	L	S	L	P	A	W	P	H	V	H	A	W	H
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.
Template Sequence		E	T	R	Q	A	T	I	L	G	.	.	.	.	.	.	.	.	.	.	.	T	R	V	G	F	G	G	A	C	T	Y	A	V	L	R	Y	L	G	R	E	G	Q	R	K	I	V	N	E	C	X	E	N	T	L	Y	L	Y	K	K	L	K	E	N	N	F	K	P	V	I	E	P	I	L	N	.	.	.	.	.	.
Template Known Secondary structure		S	S				S	S		S	.	.	.	.	.	.	.	.	.	.	.	S			S																																							T	T			B	S	S			S	S	S	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.												.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	I	I	R	V	D	E	Q	R	C	G	I	S	R	D	A	L	M	E	A	L	K	E	R	G	I	G	T	G	L	H	F	R	A	A	H	T	Q	K	Y	Y	R	E	R	F	P	T	L	S	L	P	N	T	E	W	N	S	E	R	I	C	S	L	P	L	F	P	D	M	T	T	A	D	A	D	H	V	I	T
Query Conservation
Alig confidence		.	.						.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.						.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	I	V	A	I	E	.	.	.	.	D	E	D	Y	K	E	V	C	K	K	L	R	D	R	G	I	Y	V	S	V	C	N	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	A	L	R	I	V	V	X	P	H	I	K	R	E	H	I	D	N	F	I	E
Template Known Secondary structure		.	.						.	.	.	.		T	T											T	T		B					S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S								T	T
Template Predicted Secondary structure		.	.						.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				339	340	.	.	.					.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.																									.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
		372	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	Q	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	N	S	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		389	390	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions