Job Description P77690 Confidence 99.95% Date Thu Jan 5 12:31:41 GMT 2012 Rank 112 Aligned Residues 333 % Identity 10% Template c3e77A_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: human phosphoserine aminotransferase in complex with plp Resolution 2.50 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.															.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.								.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.								.
Query Sequence		F	S	R	P	A	M	G	V	E	E	L	A	A	V	K	E	V	L	E	S	G	W	I	T	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	N	Q	A	L	E	Q	A	F	C	Q	L	T	G	N	Q	.	.	.	H	A	I	A	V	S	S	.	A	T	A	G	M	H	I	T	L	M	A	L
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.								.
Alig confidence																						.						.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.								.
Template Conservation																						.
Template Sequence		Y	F	Q	S	M	L	P	H	S	V	L	L	E	I	Q	K	E	L	L	D	.	Y	K	G	V	G	I	S	V	L	E	M	S	H	R	S	S	D	F	A	K	I	I	N	N	T	E	N	L	V	R	E	L	L	A	V	P	D	N	Y	K	V	I	F	L	Q	G	G	G	C	G	Q	F	S	A	V	P	L	N	L
Template Known Secondary structure				S														T	S	S	S	.	G	G	G	S	S	S		T	T	T			T	T	S																			T			T	T							S	S
Template Predicted Secondary structure																						.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
			69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.					.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure		.																																																		.	.	.	.
Query SS confidence		.																																																		.	.	.	.
Query Sequence		.	K	I	G	K	G	D	E	V	I	T	P	S	L	T	W	V	S	T	L	N	M	I	S	L	L	G	A	T	P	V	M	V	D	V	D	R	D	T	L	M	V	T	P	E	A	I	E	S	A	.	.	.	.	I	T	P	R	T	K	A	I	I	P	V	H	Y	A	G	A	P	A	D	I	D	A	I	R	A	I
Query Conservation		.																																																		.	.	.	.
Alig confidence		.																																																		.	.	.	.																				.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.
Template Sequence		I	G	L	K	A	G	R	C	A	D	Y	V	V	T	G	A	W	S	A	K	A	A	E	E	A	K	K	F	G	T	I	N	I	V	H	P	K	L	G	S	Y	T	K	I	P	D	P	S	T	W	N	L	N	P	D	A	S	Y	V	Y	Y	C	A	N	E	T	V	H	G	V	E	F	D	.	.	.	.	.	F	I
Template Known Secondary structure		G	G	G	S	T	T									S											T	T	T	S						S				S	S	S		S				G	G	G					T	T		S						S			T	T	T	T				S	.	.	.	.	.	S
Template Predicted Secondary structure																																																																											.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.						.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	R	Y	G	I	A	V	I	E	D	A	A	H	A	V	G	T	Y	Y	K	G	R	H	I	G	A	K	G	T	A	I	F	S	F	H	A	I	K	N	I	T	C	A	E	G	G	L	I	V	T	D	N	E	N	L	A	R	Q	L	R	M	L	K	F	H	G	L	G	V	D	A	Y	D	R	Q	T	W	G	R
Query Conservation
Alig confidence																											.	.	.	.																																							.	.	.	.	.	.	.
Template Conservation																											.	.	.	.																																							.	.	.	.	.	.	.
Template Sequence		P	D	V	K	G	A	V	L	V	C	D	M	S	S	N	F	L	S	K	P	V	D	V	S	K	.	.	.	.	F	G	V	I	F	A	G	A	Q	K	N	V	G	S	A	G	V	T	V	V	I	V	R	D	D	L	L	G	F	A	L	R	E	C	P	S	V	L	.	.	.	.	.	.	.	E	Y	K	V	Q	A
Template Known Secondary structure					T	T								T	T	T	T	T	S	S				G	G	G	.	.	.	.		S						G	G	G	T	T	S		T	T								T	T	S		S				T	T	S		G	G	G	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.																																							.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190					.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.								.	230	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	Q	A	E	V	L	T	P	G	Y	K	Y	N	L	T	D	I	N	A	A	I	A	L	T	Q	L	V	K	L	E	H	L	N	T	R	R	R	E	I	A	Q	Q	Y	Q	Q	A	L	A	A	L	P	F	Q	P	L	S	L	P	A	W	P	H	V	H	A	W	H	L	F	I	I	R	V	D	E	Q	R	C	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	N	S	S	L	Y	N	T	P	P	C	F	S	I	Y	V	M	G	L	V	L	E	W	I	K	N	N	G	G	A	A	A	M	E	K	L	S	S	I	K	S	Q	T	I	Y	E	I	I	D	N	S	Q	G	F	Y	V	C	P	V	E	P	Q	N	R	S	K	M	N	I	P	F	R	I	G	N	A	K	G	D	D
Template Known Secondary structure		T	T	T	T		S	S																				T	T																						T	S	T	T	S					S		G	G	G	B		S	S							S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	R	D	A	L	M	E	A	L	K	E	R	G	I	G	T	G	L	H	F	R	A	A	H	T	Q	K	Y	Y	R	E	R	F	P	T	L	S	L	P	N	T	E	W	N	S	E	R	I	C	S	L	P	L	F	P	D	M	T	T	A	D	A	D	H	V	I	T	A	L	Q	Q	L	A	G	Q
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	E	K	R	F	L	D	K	A	L	E	L	N	M	L	S	L	K	G	H	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	G	I	R	A	S	L	Y	N	A	V	T	I	E	D	V	Q	K	L	A	A	F	M	K	K	F	L	E	M
Template Known Secondary structure														T	T			S		B			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S							T	T	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.																								.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions