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Job DescriptionP77690
Confidence99.92%DateThu Jan 5 12:31:41 GMT 2012
Rank154Aligned Residues291
% Identity11%Templatec2x3lA_
PDB info PDB header:lyaseChain: A: PDB Molecule:orn/lys/arg decarboxylase family protein; PDBTitle: crystal structure of the orn_lys_arg decarboxylase family2 protein sar0482 from methicillin-resistant staphylococcus3 aureus
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70.........80.........90.........100........
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Query Sequence  ITTGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALKIGKGDEVITPSLTWVSTLNMISLLGATPVMVDVDRDTLM
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Template Sequence  HHPEEVILKSMKQVEKHSDYDGYFLVNGTTSGILSVIQSF. SQKKGDILMARNVHKSVLHALDISQQEGHFIETHQSPLT
Template Known Secondary structure  TS
SS
S
TTSSTT.TTSSS

TT

T



TTT
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   53......60.........70.........80.........90.. .......100.........110.........120.........130.
 
   109110.........120.........130.........140.........150.........160..... ....170.........180......
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Query Sequence  VTPEAIESAITPRTKAIIPVHYAGAPADIDAIRAIGERYGIAVIEDAAHAVGTYYKG. . RHIGAKGTAIFSFHAIKNITC
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Template Sequence  NHYNK. . VNLHKLVVLTYP. NYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTLNYQADYVVQSFHTLPAL
Template Known Secondary structure  SS..


SS.
TTS



TT


TT
TTTTSTTS


GGGGT
S




SS
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   132.... ...140........ .150.........160.........170.........180.........190.........200........
 
   187..190.........200.........210.........220.........230.........240.........250.........260......
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Query Sequence  AEGGLIVTDNENLARQLRMLKFHGLGVDAYDRQTWGRAPQAEVLTPGYKYNLTDINAAIALTQLVKLEHLNTRRREIAQQ
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Template Sequence  TMGSVLYIHKNAPYREN. . . . . . . . . . . . . . . . . . . . . IIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQ
Template Known Secondary structure  TT
TT
TT.....................S
SS




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   217..220.........230... ......240.........250.........260.........270.....
 
   267..270.........280.........290.........300.........310.........320.........330.........340......
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Query Sequence  YQQALAALPFQPLSLPAWPHVHAWHLFIIRVDEQRCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTE
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Template Sequence  LIECLENKGFEMLQVDDPL. . . . . . . . . . KLLIKYEGFTGHDIQNWFMNAHIYLELAD. . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T

SSTT..........
TTS
TTS
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   276...280.........290.... .....300.........310.........320...
 
   347..350.........360..... ....370.........
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Query Sequence  WNSERICSLPLFPDMTTAD. . ADHVITALQQLAGQ
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Template Sequence  . . . DYQALAILPLWHHDDTYLFDSLLRKIEDMILP
Template Known Secondary structure  ...SS





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   324.....330.........340.........350.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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