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Job DescriptionP77690
Confidence99.95%DateThu Jan 5 12:31:41 GMT 2012
Rank108Aligned Residues345
% Identity12%Templatec2huuA_
PDB info PDB header:transferaseChain: A: PDB Molecule:alanine glyoxylate aminotransferase; PDBTitle: crystal structure of aedes aegypti alanine glyoxylate2 aminotransferase in complex with alanine
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30 .........40......... 50.........60.........70.........80...
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Query Sequence  SRPAMGVEELAAVKEVLESGWIT. TGPKNQALEQAFCQLTGNQ. . . HAIAVSSATAGMHITLMALKIGKGDEVITPSLTW
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Template Sequence  GPSNAPQRVLDAMSRPILGHLHPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNL. LEDGDVILIGHTGH
Template Known Secondary structure  S




TTS



TTST


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   26...30.........40.........50.........60.........70.........80.........90 .........100....
 
   84.....90.........100..... ....110.........120.........130.........140.........150........
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Query Sequence  VSTLNMISLLGATPVMVDVDRD. . . . . TLMVTPEAIESAITPRTKAIIPVHYAGAPADIDAIRAIGERYGIAVIEDAAHA
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Template Sequence  WGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVAS
Template Known Secondary structure  TT


TT





SSTTTT


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TTT
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   105....110.........120.........130.........140.........150.........160.........170.........180....
 
   159160.........170.........180.........190.........200.........210.........220.........230........
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Query Sequence  VGTYYKGRHIGAKGTAIFSFHAIKNITCAEGGLIVTDNENLARQLRMLKFHGLGVDAYDRQTWGRAPQAEVLTPGYKYNL
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Template Sequence  LGGAPMFMD. . RWEIDAMYTGSQVLGAPPGITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISS
Template Known Secondary structure  BTTB


TT..TTT
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T
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GGG
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   185....190... ......200.........210.........220.........230.........240.........250.........260..
 
   239240.........250.........260.........270.........280.........290.........300.........310...... .
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Query Sequence  TDINAAIALTQLVKLEHLNTRRREIAQQYQQALAALPFQPLSLPAWPHVHAWHLFIIRVDEQRCGISRDALMEALKER. G
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Template Sequence  TLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAGFELYADPKDRLSTVTTIKVPQ. . . GVDWLKAAQYAMKTYL
Template Known Secondary structure 
TT

BSS
GGGB
TT

T...T


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   264.....270.........280.........290.........300.........310.........320.... .....330.........340
 
   318.320.........330.........340.........350...... ...360.........370.........
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Query Sequence  IGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLP. LFPDMTTADADHVITALQQLAGQ
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Template Sequence  VEISGGLGP. . . . . . . . . . . . . . . . . . . . . TAGQVFRIGLMGQNATTERVDRVLQVFQEAVAA
Template Known Secondary structure 
B


GG.....................GTTT

GGG
S
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   341........ 350.........360.........370.........380..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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