Job Description P77690 Confidence 99.83% Date Thu Jan 5 12:31:41 GMT 2012 Rank 223 Aligned Residues 297 % Identity 14% Template c2eo5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:419aa long hypothetical aminotransferase; PDBTitle: crystal structure of 4-aminobutyrate aminotransferase from sulfolobus2 tokodaii strain7 Resolution 1.90 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.						.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.																.	.	.
Query SS confidence																					.	.	.	.	.																.	.	.
Query Sequence		V	E	E	L	A	A	V	K	E	V	L	E	S	G	W	I	T	T	G	.	.	.	.	.	P	K	N	Q	A	L	E	Q	A	F	C	Q	L	T	G	.	.	.	N	Q	H	A	I	A	V	S	S	A	T	A	G	M	H	I	T	L	M	A	L	K	I	G	K	G	D	E	V	I	T	P	S	L	T	W	V	S
Query Conservation																					.	.	.	.	.																.	.	.
Alig confidence																					.	.	.	.	.																.	.	.
Template Conservation
Template Sequence		P	E	V	I	K	I	G	I	E	Q	M	Q	K	L	A	H	A	A	A	N	D	F	Y	N	I	P	Q	L	E	L	A	K	K	L	V	T	Y	S	P	G	N	F	Q	K	K	V	F	F	S	N	S	G	T	E	A	I	E	A	S	I	K	V	V	K	N	T	G	R	K	Y	I	I	A	F	L	G	G	F	H	G
Template Known Secondary structure													T	T	S				S		S		S																S	S		S	S								S	S														T	T	S								T	T
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																																				.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	N	M	I	S	L	L	G	A	T	P	V	M	V	D	V	D	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	M	V	T	P	E	A	I	E	S	A	I	T	P	R	T	K	A	I	I	P	V	H	Y
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	T	F	G	S	I	S	L	T	A	S	K	A	V	Q	R	S	I	V	G	P	F	M	P	G	V	I	H	V	P	Y	P	N	P	Y	R	N	P	W	H	I	N	G	Y	E	N	P	S	E	L	V	N	R	V	I	E	F	I	E	D	Y	I	F	V	N	L	V	P	P	E	E	V	A	G	I	F	F	E	P	I
Template Known Secondary structure		S	S									S		G	G	G	G		S	S					T	T									S	S	S		T	T				T	T	T																T					T			G	G	G								S	S
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		131	.	.	.	.	.								.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure								.	.	.	.	.	.	.																						.																															.	.
Query SS confidence								.	.	.	.	.	.	.																						.																															.	.
Query Sequence		A	G	A	P	A	D	.	.	.	.	.	.	.	I	D	A	I	R	A	I	G	E	R	Y	G	I	A	V	I	E	D	A	A	H	.	A	V	G	T	Y	Y	K	G	R	H	I	G	A	K	G	T	A	I	F	S	F	H	A	I	K	N	I	T	C	A	.	.	E	G	G	L	I	V	T	D	N	E	N	L	A
Query Conservation								.	.	.	.	.	.	.																						.																															.	.
Alig confidence								.	.	.	.	.	.	.																						.																															.	.												.	.
Template Conservation																																																																																.	.
Template Sequence		Q	G	E	G	G	Y	V	I	P	P	K	N	F	F	A	E	L	Q	K	L	A	K	K	Y	G	I	L	L	V	D	D	E	V	Q	M	G	L	G	R	T	G	K	L	F	A	I	E	N	F	N	T	V	P	D	V	I	T	L	A	K	A	L	G	G	G	I	M	P	I	G	A	T	I	F	R	K	D	L	.	.
Template Known Secondary structure		B	T	T	T	T	S	B				T	T													T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S						G	G	G	G	T	T	T	S									G	G	G	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	L	R	M	L	K	F	H	G	L	G	V	D	A	Y	D	R	Q	T	W	G	R	A	P	Q	A	E	V	L	T	P	G	Y	K	Y	N	L	T	D	I	N	A	A	I	A	L	T	Q	L	V	K	L	E	H	L	N	T	R	R	R	E	I	A	Q	Q	Y	Q	Q	A	L	A	A	L	P	F	Q	P	L	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	K	T	F	G	G	N	A	L	A	C	A	I	G	S	K	V	I	D	I	V	K	D	L	L	P	H	V	N	E	I	G	K	I	F	A	E	E	L	Q	G	L	A	D	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									T	T	S	S	S	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Template SS confidence
																																	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	A	W	P	H	V	H	A	W	H	L	F	I	I	R	V	D	E	Q	R	C	G	I	S	R	D	A	L	M	E	A	L	K	E	R	G	I	G	T	G	L	H	F	R	A	A	H	T	Q	K	Y	Y	R	E	R	F	P	T	L	S	L	P	N	T	E	W	N	S	E	R	I	C	S	L	P	L	F	P	D
Query Conservation
Alig confidence		.	.	.	.																			.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																			.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	D	V	R	G	I	G	L	A	W	G	L	E	Y	N	E	K	K	V	.	.	.	R	D	R	I	I	G	E	S	F	K	R	G	L	L	L	L	P	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	A	I	R	V	I	P	P	L	V
Template Known Secondary structure		.	.	.	.						T	T							S					.	.	.											T	T							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								T	T
Template Predicted Secondary structure		.	.	.	.																			.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.				.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.																										.	.	390	.	.	.	.	.	.	.	.
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	T	A	D	A	D	H	V	I	T	A	L	Q	Q	L	A	G	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	E	E	E	A	K	Q	G	L	D	I	L	K	K	V	I	K	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions