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Job DescriptionP77690
Confidence99.97%DateThu Jan 5 12:31:41 GMT 2012
Rank45Aligned Residues337
% Identity18%Templatec2dkjB_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine hydroxymethyltransferase; PDBTitle: crystal structure of t.th.hb8 serine hydroxymethyltransferase
Resolution1.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SEFLPF. . SRPAMGVEELAAVKEVLESG. . . . . . . . . WITTGPKNQA. . . . LEQAFCQLTGNQHA. IAVSSATAGMHITL
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Template Sequence  REGLELIASENFVSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAWANVQPHSGSQANMAVY
Template Known Secondary structure  S

TT




TSGGGG



TTSSS

T
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   23......30.........40.........50.........60.........70.........80.........90.........100..
 
   66...70.........80.... .....90.........100....... ..110.........120.........130........
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Query Sequence  MALKIGKGDEVITPSLTWV. . . STLNMISLLGATPVMVDVDRDTL. . . . MVTPEAIESAITPRTKAIIPVHYAGAPADID
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Template Sequence  MAL. MEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASAYPRFWDFK
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TT

GGGT

GGGT
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TTT
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   103.. ....110.........120.........130.........140.........150.........160.........170.........180.
 
   139140.........150.........160.........170. ........180.........190.........200.........210.......
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Query Sequence  AIRAIGERYGIAVIEDAAHAVGTYYKGRHIGAK. GTAIFSFHAIKNITCAEGGLIVTDNENLARQLRMLKFHGLGVDAYD
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Template Sequence  AFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRGGLILSNDPELGKRIDKLIFPGIQ. . . . .
Template Known Secondary structure  T

TTTTTSS


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   182.......190.........200.........210.........220.........230.........240.........250......
 
   218.220.........230.........240.........250.........260.........270.........280.........290.......
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Query Sequence  RQTWGRAPQAEVLTPGYKYNLTDINAAIALTQLVKLEHLNTRRREIAQQYQQALAALPFQPLSLPAWPHVHAWHLFIIRV
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Template Sequence  . . . . . . . . . . . . . GGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRGYRIVTGGTDNH. . . . . . . LFLV
Template Known Secondary structure  .............SS

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   257..260.........270.........280.........290.........300.........310.. ....
 
   298.300.........310.........320.........330.........340.........350........ .360.........370...
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Query Sequence  DEQRCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLF. . . . PDMTTADADHVITAL
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Template Sequence  DLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRV. . . . . . . . . . . . . . . TSGIRIGTPAITTRGFTPEEMPLVAELI
Template Known Secondary structure 
GGGT

TTT


TT

S
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   317..320.........330.........340.........350... ......360.........370.........380.
 
   374.....
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Query Sequence  QQLAGQ
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Template Sequence  DRALLE
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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