Job Description P77690 Confidence 99.86% Date Thu Jan 5 12:31:41 GMT 2012 Rank 209 Aligned Residues 305 % Identity 13% Template c1z7dE_ PDB info PDB header:transferase Chain: E: PDB Molecule:ornithine aminotransferase; PDBTitle: ornithine aminotransferase py00104 from plasmodium yoelii Resolution 2.10 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.					.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		V	E	E	L	A	A	V	K	E	V	L	E	S	G	W	I	T	T	G	.	.	.	.	P	K	N	Q	A	L	E	Q	A	F	C	Q	L	T	G	N	Q	H	A	I	A	V	S	S	A	T	A	G	M	H	I	T	L	M	A	L	K	I	G	K	G	D	E	V	I	T	P	S	L	T	W	V	S	T	L	N	M
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.																																					.															.	.	.	.	.	.
Template Conservation																																																													.															.	.	.	.	.	.
Template Sequence		P	N	I	L	N	A	M	I	N	Q	A	K	N	L	T	I	C	S	R	A	F	F	S	V	P	L	G	I	C	E	R	Y	L	T	N	L	L	G	Y	D	K	V	L	M	M	N	T	G	A	E	A	N	E	T	A	Y	K	L	C	.	R	K	W	G	Y	E	V	K	K	I	P	E	N	M	.	.	.	.	.	.
Template Known Secondary structure													T	T		S				T	T	S																	T		S						S	S													.							T	S				T	T		.	.	.	.	.	.
Template Predicted Secondary structure																																																													.															.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.																						.
Query SS confidence																																																	.	.	.	.																						.
Query Sequence		I	S	L	L	G	A	T	P	V	M	V	D	V	D	R	D	T	L	M	V	T	P	E	A	I	E	S	A	I	T	P	R	T	K	A	I	I	P	V	H	Y	A	G	A	P	A	D	.	.	.	.	I	D	A	I	R	A	I	G	E	R	Y	G	I	A	V	I	E	D	A	A	H	.	A	V	G	T	Y	Y	K
Query Conservation																																																	.	.	.	.																						.
Alig confidence		.	.	.																																													.	.	.	.																						.
Template Conservation		.	.	.
Template Sequence		.	.	.	A	K	I	V	V	C	F	S	K	V	P	Y	D	D	L	E	A	L	E	E	E	L	K	D	P	N	V	C	A	F	I	V	E	P	I	Q	G	E	A	G	V	I	V	P	S	D	N	Y	L	Q	G	V	Y	D	I	C	K	K	Y	N	V	L	F	V	A	D	E	V	Q	T	G	L	G	R	T	G	K
Template Known Secondary structure		.	.	.												T	T										T	S	T	T								S	S	B	S	T	T	T		B				T	T												T	T								T	T	T	T	T	T	T	T	S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		G	R	H	I	G	A	K	G	T	A	I	F	S	F	H	A	I	K	N	I	T	C	A	E	G	.	G	L	I	V	T	D	N	E	N	L	A	R	Q	L	R	M	L	K	F	H	G	L	G	V	D	A	Y	D	R	Q	T	W	G	R	A	P	Q	A	E	V	L	T	P	G	Y	K	Y	N	L	T	D	I	N	A
Query Conservation																											.
Alig confidence																											.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	C	V	H	H	Y	N	V	K	P	D	V	I	L	L	G	K	A	L	S	G	G	H	Y	P	I	S	A	V	L	A	N	D	D	I	M	L	V	I	K	P	G	E	H	G	S	T	Y	G	G	N	P	L	A	A	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	V	E	A
Template Known Secondary structure		S	S	G	G	G	G	G	T				S						G	G	G	G	T	T	S	S													T	T											T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.																			.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	L	T	Q	L	V	K	L	E	H	L	N	T	R	R	R	E	I	A	Q	Q	Y	Q	Q	A	L	A	A	L	P	F	Q	P	L	S	L	P	A	W	P	H	V	H	A	W	H	L	F	I	I	R	V	D	E	Q	R	C	G	I	S	R	D	A	L	M	E	A	L	K	E	R	G	I	G	T	G	L	H
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.
Template Sequence		L	N	V	L	I	N	E	K	L	C	E	N	A	E	K	L	G	G	P	F	L	E	N	L	K	R	E	L	K	D	S	K	I	V	R	D	V	R	G	K	G	L	.	.	.	.	.	.	.	.	L	C	A	I	E	F	K	N	E	L	V	N	V	L	D	I	C	L	K	L	K	E	N	G	L	I	T	R	D	V
Template Known Secondary structure								T	T																				T	T	T		T	T								T	T	.	.	.	.	.	.	.	.								T	T	T													T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.									.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	A	A	H	T	Q	K	Y	Y	R	E	R	F	P	T	L	S	L	P	N	T	E	W	N	S	E	R	I	C	S	L	P	L	F	P	D	M	T	T	A	D	A	D	H	V	I	T	A	L	Q	Q	L	A	G	Q
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	T	I	R	L	T	P	P	L	C	I	T	K	E	Q	L	D	E	C	T	E	I	I	V	K	T	V	K	F
Template Known Secondary structure		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		378																										.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions