Job Description P77690 Confidence 99.90% Date Thu Jan 5 12:31:41 GMT 2012 Rank 174 Aligned Residues 305 % Identity 15% Template c1ynuA_ PDB info PDB header:lyase Chain: A: PDB Molecule:1-aminocyclopropane-1-carboxylate synthase; PDBTitle: crystal structure of apple acc synthase in complex with l-vinylglycine Resolution 2.25 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.											.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.																																															.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.																																															.
Query Sequence		I	T	T	G	P	K	N	Q	A	L	E	Q	A	F	C	Q	L	T	G	.	.	.	.	.	.	.	.	.	.	N	Q	H	A	I	A	V	S	S	A	T	A	G	M	H	I	T	L	M	A	L	K	I	G	K	G	D	E	V	I	T	P	S	L	T	W	V	S	T	L	N	M	I	S	L	L	.	G	A	T	P
Query Conservation																					.	.	.	.	.	.	.	.	.	.																																															.
Alig confidence																					.	.	.	.	.	.	.	.	.	.																						.																									.
Template Conservation																																																				.
Template Sequence		F	Q	D	Y	H	G	L	P	A	F	K	K	A	M	V	D	F	M	A	E	I	R	G	N	K	V	T	F	D	P	N	H	L	V	L	T	A	G	A	T	S	A	N	E	T	F	I	F	C	L	.	A	D	P	G	E	A	V	L	I	P	T	P	Y	Y	P	G	F	D	R	D	L	K	W	R	T	G	V	E	I
Template Known Secondary structure					T	T																	T	T	T	S	S				G	G	G																			.			T	T							S	S			T	T					T	T	T	T	T
Template Predicted Secondary structure																																																				.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		98	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120										.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure												.														.	.	.	.	.	.	.	.	.																	.	.	.
Query SS confidence												.														.	.	.	.	.	.	.	.	.																	.	.	.
Query Sequence		V	M	V	D	V	D	R	D	T	L	.	M	V	T	P	E	A	I	E	S	A	I	T	P	.	.	.	.	.	.	.	.	.	R	T	K	A	I	I	P	V	H	Y	A	G	A	P	A	D	.	.	.	I	D	A	I	R	A	I	G	E	R	Y	G	I	A	V	I	E	D	A	A	H	A	V	G	T	Y	Y	K
Query Conservation												.														.	.	.	.	.	.	.	.	.																	.	.	.
Alig confidence												.														.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation
Template Sequence		V	P	I	H	C	T	S	S	N	G	F	Q	I	T	E	T	A	L	E	E	A	Y	Q	E	A	E	K	R	N	L	R	V	K	G	V	L	V	T	N	P	S	N	P	L	G	T	T	M	T	R	N	E	L	Y	L	L	L	S	F	V	E	D	K	G	I	H	L	I	S	D	E	I	Y	S	G	T	A	F	S	S
Template Known Secondary structure								G	G	G	T	T																	T	T										S	S		T	T	T																				T								T	T	G	G	G			S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		165	.	.	.										.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.																		.	.
Query SS confidence						.	.	.	.	.	.	.	.	.																		.	.
Query Sequence		G	R	H	I	.	.	.	.	.	.	.	.	.	G	A	K	G	T	A	I	F	S	F	H	A	I	K	N	I	T	.	.	C	A	E	G	G	L	I	V	T	D	N	E	N	L	A	R	Q	L	R	M	L	K	F	H	G	L	G	V	D	A	Y	D	R	Q	T	W	G	R	A	P	Q	A	E	V	L	T	P	G
Query Conservation						.	.	.	.	.	.	.	.	.																		.	.
Alig confidence						.	.	.	.	.	.	.	.	.																		.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	S	F	I	S	V	M	E	V	L	K	D	S	E	V	W	Q	R	V	H	V	V	Y	S	L	S	K	D	L	G	L	P	G	F	R	V	G	A	I	Y	S	N	D	D	M	V	V	A	A	A	T	K	M	S	S	F	G	L	V	S	S	Q	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S									T	T				G	G	G	G							S	S	S	S	S			G	G	G								S													T	T	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.				.	.	.	.	310
Predicted Secondary structure																																																																										.	.	.
Query SS confidence																																																																										.	.	.
Query Sequence		Y	K	Y	N	L	T	D	I	N	A	A	I	A	L	T	Q	L	V	K	L	E	H	L	N	T	R	R	R	E	I	A	Q	Q	Y	Q	Q	A	L	A	A	L	P	F	Q	P	L	S	L	P	A	W	P	H	V	H	A	W	H	L	F	I	I	R	V	D	E	Q	R	C	G	I	S	.	.	.	R	D	A	L	M
Query Conservation																																																																										.	.	.
Alig confidence		.	.	.	.	.	.	.																																			.	.																														.	.	.
Template Conservation		.	.	.	.	.	.	.																																			.	.
Template Sequence		.	.	.	.	.	.	.	H	L	L	S	A	M	L	S	D	K	K	L	T	K	N	Y	I	A	E	N	H	K	R	L	K	Q	R	Q	K	K	L	V	S	G	.	.	L	Q	K	S	G	I	S	C	L	N	G	N	A	G	L	F	C	W	V	D	M	R	H	L	L	R	S	N	T	F	E	A	E	M	E	L	W
Template Known Secondary structure		.	.	.	.	.	.	.							T	T																											.	.			T	T	T								S	S	S							G	G	G		S	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.																																			.	.
Template SS confidence
									311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.			.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		311	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		E	A	L	K	E	R	.	G	I	G	T	G	L	H	F	R	A	A	H	T	Q	K	Y	Y	R	E	R	F	P	T	L	S	L	P	N	T	E	W	N	S	E	R	I	C	S	L	P	L	F	P	D	M	T	T	A	D	A	D	H	V	I	T	A	L	Q	Q	L	A	G	Q
Query Conservation								.
Alig confidence								.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		K	K	I	V	Y	E	V	H	L	N	I	S	P	G	S	S	C	H	C	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	W	F	R	V	C	F	.	A	N	L	P	E	R	T	L	D	L	A	M	Q	R	L	K	A	F	V	G	E
Template Known Secondary structure							T	T							T	T	T	T	T		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T							.	S	S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.																				.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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