 |
Job Description | P0A6V8 | Confidence | 99.51% | Date | Thu Jan 5 11:04:01 GMT 2012 |
Rank | 46 | Aligned Residues | 109 |
% Identity | 13% | Template | d1zc6a1 |
SCOP info | Ribonuclease H-like motif
| Actin-like ATPase domain
| BadF/BadG/BcrA/BcrD-like
|
Resolution | 2.20 |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | T | K | Y | A | L | V | G | D | V | G | G | T | N | A | R | L | A | L | C | D | I | A | S | G | E | I | S | Q | A | K | T | Y | S | G | L | D | Y | P | S | L | E | A | V | I | R | V | Y | L | E | E | H | K | V | E | V | K | D | G | C | I | A | I | A | C | P | I | T | G | D | W | V | A | M | T | N | H | T | W | A |
Query Conservation |   |
|   |   |
|   |
|   |
|
|
|
|
|
|   |   |
|   |
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|
|
|
|   |
|
|
|   |
|   |   |   |
|   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |
Template Sequence |   |
S | I | R | Y | L | I | G | V | D | G | G | G | T | G | T | R | I | R | L | H | A | S | D | G | T | P | L | A | X | A | E | G | G | A | S | A | L | S | Q | G | I | A | K | S | W | Q | A | V | L | S | T | L | E | A | A | F | Q | Q | A | G | L | P | A | A | P | A | S | A | C | A | I | G | L | G | L | S | G | V | H | N |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  | S |
|
|
| G | G | G |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|
| G | G | G |  |  |  |  |  |  |  | S |
|
|
| T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | |
|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | S | I | A | E | M | K | K | N | L | G | F | . |
. |
S | H | L | E | I | I | N | D | F | T | A | V | S | M | A | I | P |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   | . | . |   |   |
|   |
|   |
|
|   |   |
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|   |   |
|
|   |
|
|   |
Template Sequence |   |
R | Q | W | A | G | E | F | E | S | Q | A | P | G | F | A | R | L | S | L | A | T | D | G | Y | T | T | L | L | G | A | H |
Template Known Secondary structure |   |
T | S |  |  |  |  |  |  |  | T |
|
|
|
| S |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|