Job Description P0A6V8 Confidence 43.25% Date Thu Jan 5 11:04:01 GMT 2012 Rank 165 Aligned Residues 103 % Identity 14% Template d1k8ka1 SCOP info Ribonuclease H-like motif Actin-like ATPase domain Actin/HSP70 Resolution 2.00

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.																																				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	K	Y	A	L	V	G	D	V	G	G	T	N	A	R	L	A	L	C	D	I	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	I	S	Q	A	K	T	Y	S	G	L	D	Y	P	S	L	E	A	V	I
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.
Template Sequence		L	P	.	.	A	C	V	V	D	C	G	T	G	Y	T	K	L	G	Y	A	G	N	T	E	P	Q	F	I	I	P	S	C	I	A	I	K	E	V	M	K	G	V	D	D	L	D	F	F	I	G	D	E	A	I	E	K	P	T	Y	A	T	K	W	P	I	R	H	G	I	V	E	D	W	D	L	M	E	R	F	M
Template Known Secondary structure		S		.	.								S	S							T	T		S	S		S					S										T	T	G	G	G					G	G	G	G	T	S		T	T	S								T	T			S
Template Predicted Secondary structure				.	.
Template SS confidence
		5	.			.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.							.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.
Query Sequence		R	V	Y	L	E	E	H	K	V	E	V	K	D	G	C	I	A	I	A	C	P	I	T	G	D	W	V	A	M	T	N	H	T	W	A	F	.	.	.	.	.	.	S	I	A	E	M	K	K	N	L	G	F	S	H	L	E	I	I	N	D	F	T	A	V	S	M	A	I	P	M	L	K	K	E	H	L	I	Q	F
Query Conservation																																						.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Q	V	I	F	K	Y	.	.	.	.	.	.	.	.	.	.	L	R	A	E	P	E	D	H	Y	F	L	L	T	E	P	P	L	N	T	P	E	N	R	E	Y	T	A	E	I	M	F	E	S	F	N	V	P	G	L	Y	I	A	V	Q	A	V	L	A	L	A	A	.	.	.	.	.	.	.	.	.	.	.	S
Template Known Secondary structure							T	T	.	.	.	.	.	.	.	.	.	.	T				G	G	G									T	T																T	S			S															.	.	.	.	.	.	.	.	.	.	.	G
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100											.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.												.
		120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	A	E	P	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	T	S	R	Q	V	G
Template Known Secondary structure		G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions