Job Description P0A6V8 Confidence 78.98% Date Thu Jan 5 11:04:01 GMT 2012 Rank 133 Aligned Residues 56 % Identity 13% Template c3psfA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(236-1259) Resolution 2.59 Å

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		5	.	.	.	.	10	.						.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure									.	.	.	.	.																										.	.	.	.
Query SS confidence									.	.	.	.	.																										.	.	.	.
Query Sequence		A	L	V	G	D	V	G	.	.	.	.	.	G	T	N	A	R	L	A	L	C	D	I	A	S	G	E	I	S	Q	A	K	T	Y	S	G	L	.	.	.	.	D	Y	P	S	L	E	A	V	I	R	V	Y	L	E	E	H	K	V	E	V	K	D	G	C
Query Conservation									.	.	.	.	.																										.	.	.	.
Alig confidence									.	.	.	.	.																										.	.	.	.
Template Conservation
Template Sequence		I	L	S	L	T	C	G	Q	G	R	F	G	A	D	A	I	I	A	V	Y	V	N	R	K	G	D	F	I	R	D	Y	K	I	V	D	N	P	F	D	K	T	N	P	E	K	F	E	D	T	L	D	N	I	I	Q	S	C	Q	P	N	A	I	G	I	N
Template Known Secondary structure								T	T			T	T	T	S									T	T	S										S		T	T		S	S																			S
Template Predicted Secondary structure
Template SS confidence
		750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions