Job Description P0A6V8 Confidence 30.05% Date Thu Jan 5 11:04:01 GMT 2012 Rank 176 Aligned Residues 127 % Identity 15% Template c3dwlB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:actin-related protein 3; PDBTitle: crystal structure of fission yeast arp2/3 complex lacking the arp22 subunit Resolution 3.78 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.																																	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	G	D	V	G	G	T	N	A	R	L	A	L	C	D	I	A	S	G	E	I	S	Q	A	K	T	Y	S	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	P	S	L	E	A	V	I	R	V	Y	L	E	E	H	K
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	M	D	N	G	T	G	Y	S	K	L	G	Y	A	G	N	D	A	P	S	Y	V	F	P	T	V	I	A	T	R	T	E	D	L	D	F	F	I	G	N	D	A	L	K	K	A	S	A	G	Y	S	L	D	Y	P	I	R	H	G	Q	I	E	N	W	D	H	M	E	R	F	W	Q	Q	S	L	F	K	Y	L
Template Known Secondary structure								S	S							T	T	S	S	S		S													S	S					T						T										S			T	T																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		54				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		V	.	.	.	E	V	K	D	G	C	I	A	I	A	C	P	I	T	G	D	W	V	A	M	T	N	H	T	W	A	F	S	I	A	E	M	K	K	N	L	G	F	S	H	L	E	I	I	N	D	F	T	A	V	S	M	A	I	P	M	L	K	K	E	H	L	I	Q	F	G	G	A	E	P	V	E	G	K	P	I
Query Conservation			.	.	.
Alig confidence			.	.	.																	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	C	E	P	E	D	H	Y	F	L	L	T	E	P	P	L	N	P	P	E	.	.	.	.	.	.	.	N	R	E	N	T	A	E	I	M	F	E	S	F	N	C	A	G	L	Y	I	A	V	Q	A	V	L	A	L	A	A	.	.	.	.	.	.	.	.	.	.	.	S	W	T	S	S	K	V	T	D	R	S	L
Template Known Secondary structure					G	G	G									T	T					.	.	.	.	.	.	.												T	T			S														G	.	.	.	.	.	.	.	.	.	.	.	G	G	G	S	T	T	T		S
Template Predicted Secondary structure																						.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.								.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.												.	.	170	.	.	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	Y	G	A	G	T	G	L	G	V	A	H	L	V	H	V	D	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	T	V	V	D	S	G	D	G	V	T	H	I	I	P	V	A	E	G
Template Known Secondary structure									S	S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions