Job Description P0A6V8 Confidence 58.58% Date Thu Jan 5 11:04:01 GMT 2012 Rank 155 Aligned Residues 57 % Identity 18% Template c3c6aA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:terminase large subunit; PDBTitle: crystal structure of the rb49 gp17 nuclease domain Resolution 1.16 Å

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		3	.	.	.	.	.	.	10					.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																.	.
Query SS confidence										.	.	.	.																.	.
Query Sequence		K	Y	A	L	V	G	D	V	.	.	.	.	G	G	T	N	A	R	L	A	L	C	D	I	A	S	G	.	.	E	I	S	Q	A	K	T	Y	S	G	L	D	Y	P	S	L	E	A	V	I	R	V	Y	L	E	E	H	K	V	E	V	K	D	G
Query Conservation										.	.	.	.																.	.
Alig confidence										.	.	.	.																.	.
Template Conservation
Template Sequence		K	Y	V	A	T	L	D	C	S	E	G	R	G	Q	D	Y	H	A	L	Q	I	I	D	I	T	E	F	P	Y	K	Q	V	A	V	Y	H	S	N	T	T	S	H	F	I	L	P	D	I	V	F	K	Y	L	M	M	Y	N	E	C	P	V	Y	I
Template Known Secondary structure												S	S	S	S											S	S	S	S										S				T	T	T												T	T	S
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions